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Cluster: Rep_194_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_194_c_6 Rep_194_c_6_13 19669 20931 + 3.A.1.125.1
sulfatase Rep_194_c_6 Rep_194_c_6_14 21003 22673 + S1_2
TC Rep_194_c_6 Rep_194_c_6_15 22689 24350 + 4.C.1.1.7
pfam Rep_194_c_6 Rep_194_c_6_16 24408 25430 - Phytase-like
CAZyme Rep_194_c_6 Rep_194_c_6_17 25437 28592 - GH2
NULL(UNKNOWN) Rep_194_c_6 Rep_194_c_6_18 28760 29023 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_194_c_6 Rep_194_c_6_19 29141 30340 + CE19
pfam Rep_194_c_6 Rep_194_c_6_20 30454 31179 - adh_short | adh_short_C2
CAZyme Rep_194_c_6 Rep_194_c_6_21 31176 33494 - GH105
Gene ID: Rep_194_c_6_13
Type: TC
Location: 19669 - 20931 (+)
Gene ID: Rep_194_c_6_14
Type: sulfatase
Location: 21003 - 22673 (+)
Gene ID: Rep_194_c_6_15
Type: TC
Location: 22689 - 24350 (+)
Gene ID: Rep_194_c_6_16
Type: pfam
Location: 24408 - 25430 (-)
Gene ID: Rep_194_c_6_17
Type: CAZyme
Location: 25437 - 28592 (-)
Gene ID: Rep_194_c_6_18
Type:
Location: 28760 - 29023 (+)
Gene ID: Rep_194_c_6_19
Type: CAZyme
Location: 29141 - 30340 (+)
Gene ID: Rep_194_c_6_20
Type: pfam
Location: 30454 - 31179 (-)
Gene ID: Rep_194_c_6_21
Type: CAZyme
Location: 31176 - 33494 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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