Cluster: Rep_194_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_194
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_194_c_5 | Rep_194_c_5_622 | 718204 | 719490 | - | 9.B.126.2.2 |
| CAZyme | Rep_194_c_5 | Rep_194_c_5_623 | 720058 | 721737 | - | GH13_38 |
| pfam | Rep_194_c_5 | Rep_194_c_5_624 | 721803 | 722690 | - | Acyl_transf_1 |
| pfam | Rep_194_c_5 | Rep_194_c_5_625 | 723166 | 724563 | - | Mfa2 |
| TC | Rep_194_c_5 | Rep_194_c_5_626 | 724725 | 725957 | - | 9.B.196.1.2 |
| pfam | Rep_194_c_5 | Rep_194_c_5_627 | 725954 | 728284 | - | TonB_dep_Rec_b-barrel | Plug | CarboxypepD_reg | OMP_b-brl_3 |
| TC | Rep_194_c_5 | Rep_194_c_5_628 | 728305 | 729063 | - | 9.B.115.1.6 |
Gene ID: Rep_194_c_5_622
Type: TC
Location: 718204 - 719490 (-)
Type: TC
Location: 718204 - 719490 (-)
Gene ID: Rep_194_c_5_623
Type: CAZyme
Location: 720058 - 721737 (-)
Type: CAZyme
Location: 720058 - 721737 (-)
Gene ID: Rep_194_c_5_624
Type: pfam
Location: 721803 - 722690 (-)
Type: pfam
Location: 721803 - 722690 (-)
Gene ID: Rep_194_c_5_625
Type: pfam
Location: 723166 - 724563 (-)
Type: pfam
Location: 723166 - 724563 (-)
Gene ID: Rep_194_c_5_626
Type: TC
Location: 724725 - 725957 (-)
Type: TC
Location: 724725 - 725957 (-)
Gene ID: Rep_194_c_5_627
Type: pfam
Location: 725954 - 728284 (-)
Type: pfam
Location: 725954 - 728284 (-)
Gene ID: Rep_194_c_5_628
Type: TC
Location: 728305 - 729063 (-)
Type: TC
Location: 728305 - 729063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.