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Cluster: Rep_194_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_194_c_5 Rep_194_c_5_58 61878 63218 + 2.A.119.1.2
TF Rep_194_c_5 Rep_194_c_5_59 63341 67396 - HTH_AraC
CAZyme Rep_194_c_5 Rep_194_c_5_60 67839 68969 + GH43_24
NULL(UNKNOWN) Rep_194_c_5 Rep_194_c_5_61 69441 73043 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_194_c_5 Rep_194_c_5_62 73146 77396 + GH43_19 | GH51_2
pfam Rep_194_c_5 Rep_194_c_5_63 77532 78821 + DDE_Tnp_1 | DDE_Tnp_1_4
NULL(UNKNOWN) Rep_194_c_5 Rep_194_c_5_64 79022 81733 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_194_c_5 Rep_194_c_5_65 81774 85106 + 1.B.14.6.1
Gene ID: Rep_194_c_5_58
Type: TC
Location: 61878 - 63218 (+)
Gene ID: Rep_194_c_5_59
Type: TF
Location: 63341 - 67396 (-)
Gene ID: Rep_194_c_5_60
Type: CAZyme
Location: 67839 - 68969 (+)
Gene ID: Rep_194_c_5_61
Type:
Location: 69441 - 73043 (+)
Gene ID: Rep_194_c_5_62
Type: CAZyme
Location: 73146 - 77396 (+)
Gene ID: Rep_194_c_5_63
Type: pfam
Location: 77532 - 78821 (+)
Gene ID: Rep_194_c_5_64
Type:
Location: 79022 - 81733 (+)
Gene ID: Rep_194_c_5_65
Type: TC
Location: 81774 - 85106 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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