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Cluster: Rep_194_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_194_c_4 Rep_194_c_4_238 308896 311016 + 3.A.16.1.1
pfam Rep_194_c_4 Rep_194_c_4_239 311013 311861 + CTP_transf_1
CAZyme Rep_194_c_4 Rep_194_c_4_240 312011 313138 - GT19
pfam Rep_194_c_4 Rep_194_c_4_241 313135 313953 - SurE
TC Rep_194_c_4 Rep_194_c_4_242 313956 314816 + 8.A.3.2.3
pfam Rep_194_c_4 Rep_194_c_4_243 314819 315754 + ParBc | HTH_ParB | ParB_dimer
pfam Rep_194_c_4 Rep_194_c_4_244 315784 316620 + DUF5683
CAZyme Rep_194_c_4 Rep_194_c_4_245 316681 317988 + GH23
STP Rep_194_c_4 Rep_194_c_4_246 318071 320344 + HD
CAZyme Rep_194_c_4 Rep_194_c_4_247 320442 321410 + CE8
Gene ID: Rep_194_c_4_238
Type: TC
Location: 308896 - 311016 (+)
Gene ID: Rep_194_c_4_239
Type: pfam
Location: 311013 - 311861 (+)
Gene ID: Rep_194_c_4_240
Type: CAZyme
Location: 312011 - 313138 (-)
Gene ID: Rep_194_c_4_241
Type: pfam
Location: 313135 - 313953 (-)
Gene ID: Rep_194_c_4_242
Type: TC
Location: 313956 - 314816 (+)
Gene ID: Rep_194_c_4_243
Type: pfam
Location: 314819 - 315754 (+)
Gene ID: Rep_194_c_4_244
Type: pfam
Location: 315784 - 316620 (+)
Gene ID: Rep_194_c_4_245
Type: CAZyme
Location: 316681 - 317988 (+)
Gene ID: Rep_194_c_4_246
Type: STP
Location: 318071 - 320344 (+)
Gene ID: Rep_194_c_4_247
Type: CAZyme
Location: 320442 - 321410 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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