dbCAN Logo

Cluster: Rep_194_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_194_c_3 Rep_194_c_3_547 723662 725227 - CBM91 | GH43_10
peptidase Rep_194_c_3 Rep_194_c_3_548 725600 726403 + S09.UPW
CAZyme Rep_194_c_3 Rep_194_c_3_549 726549 728549 + PL11_1
CAZyme Rep_194_c_3 Rep_194_c_3_550 728895 731714 + GH2
NULL(UNKNOWN) Rep_194_c_3 Rep_194_c_3_551 731927 735109 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_194_c_3 Rep_194_c_3_552 735517 737880 + PL11_1
CAZyme Rep_194_c_3 Rep_194_c_3_553 737960 738667 + GH88
CAZyme Rep_194_c_3 Rep_194_c_3_554 738625 739206 + GH88
CAZyme Rep_194_c_3 Rep_194_c_3_555 739193 740419 + GH154
TF Rep_194_c_3 Rep_194_c_3_556 740648 744511 - HTH_AraC
TC Rep_194_c_3 Rep_194_c_3_557 744549 746243 - 2.A.58.2.2
Gene ID: Rep_194_c_3_547
Type: CAZyme
Location: 723662 - 725227 (-)
Gene ID: Rep_194_c_3_548
Type: peptidase
Location: 725600 - 726403 (+)
Gene ID: Rep_194_c_3_549
Type: CAZyme
Location: 726549 - 728549 (+)
Gene ID: Rep_194_c_3_550
Type: CAZyme
Location: 728895 - 731714 (+)
Gene ID: Rep_194_c_3_551
Type:
Location: 731927 - 735109 (+)
Gene ID: Rep_194_c_3_552
Type: CAZyme
Location: 735517 - 737880 (+)
Gene ID: Rep_194_c_3_553
Type: CAZyme
Location: 737960 - 738667 (+)
Gene ID: Rep_194_c_3_554
Type: CAZyme
Location: 738625 - 739206 (+)
Gene ID: Rep_194_c_3_555
Type: CAZyme
Location: 739193 - 740419 (+)
Gene ID: Rep_194_c_3_556
Type: TF
Location: 740648 - 744511 (-)
Gene ID: Rep_194_c_3_557
Type: TC
Location: 744549 - 746243 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List