Cluster: Rep_1939_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1939_c_1 | Rep_1939_c_1_411 | 419456 | 420421 | + | 9.B.146.1.6 |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_412 | 420474 | 421841 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | Rep_1939_c_1 | Rep_1939_c_1_413 | 421875 | 422996 | + | GT28 |
Gene ID: Rep_1939_c_1_411
Type: TC
Location: 419456 - 420421 (+)
Type: TC
Location: 419456 - 420421 (+)
Gene ID: Rep_1939_c_1_412
Type: pfam
Location: 420474 - 421841 (+)
Type: pfam
Location: 420474 - 421841 (+)
Gene ID: Rep_1939_c_1_413
Type: CAZyme
Location: 421875 - 422996 (+)
Type: CAZyme
Location: 421875 - 422996 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.