Cluster: Rep_1939_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1939_c_1 | Rep_1939_c_1_101 | 108310 | 109464 | + | GT19 |
| TC | Rep_1939_c_1 | Rep_1939_c_1_102 | 109448 | 111208 | + | 3.A.1.106.3 |
| CAZyme | Rep_1939_c_1 | Rep_1939_c_1_103 | 111214 | 112548 | + | GT30 |
Gene ID: Rep_1939_c_1_101
Type: CAZyme
Location: 108310 - 109464 (+)
Type: CAZyme
Location: 108310 - 109464 (+)
Gene ID: Rep_1939_c_1_102
Type: TC
Location: 109448 - 111208 (+)
Type: TC
Location: 109448 - 111208 (+)
Gene ID: Rep_1939_c_1_103
Type: CAZyme
Location: 111214 - 112548 (+)
Type: CAZyme
Location: 111214 - 112548 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.