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Cluster: Rep_1939_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1939_c_0 Rep_1939_c_0_80 98004 99017 + 2.A.28.2.4
TC Rep_1939_c_0 Rep_1939_c_0_81 99119 99796 + 9.B.120.1.4
pfam Rep_1939_c_0 Rep_1939_c_0_82 99860 100435 + UDG
TC Rep_1939_c_0 Rep_1939_c_0_83 100915 101910 + 2.A.28.2.4
NULL(UNKNOWN) Rep_1939_c_0 Rep_1939_c_0_84 102483 102737 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1939_c_0 Rep_1939_c_0_85 102865 103866 + 2.A.28.2.4
NULL(UNKNOWN) Rep_1939_c_0 Rep_1939_c_0_86 104003 104629 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1939_c_0 Rep_1939_c_0_87 104649 105536 - Radical_SAM
TC Rep_1939_c_0 Rep_1939_c_0_88 105608 106516 - 2.A.7.3.31
STP Rep_1939_c_0 Rep_1939_c_0_89 106653 111215 - GATase_2
pfam Rep_1939_c_0 Rep_1939_c_0_90 111402 112082 - UDG
CAZyme Rep_1939_c_0 Rep_1939_c_0_91 112098 113708 - GT83
CAZyme Rep_1939_c_0 Rep_1939_c_0_92 113718 115277 - GT83
TC Rep_1939_c_0 Rep_1939_c_0_93 115274 115867 - 9.B.27.2.5
NULL(UNKNOWN) Rep_1939_c_0 Rep_1939_c_0_94 115956 116912 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1939_c_0 Rep_1939_c_0_95 117328 118047 + 9.B.20.1.4
Gene ID: Rep_1939_c_0_80
Type: TC
Location: 98004 - 99017 (+)
Gene ID: Rep_1939_c_0_81
Type: TC
Location: 99119 - 99796 (+)
Gene ID: Rep_1939_c_0_82
Type: pfam
Location: 99860 - 100435 (+)
Gene ID: Rep_1939_c_0_83
Type: TC
Location: 100915 - 101910 (+)
Gene ID: Rep_1939_c_0_84
Type:
Location: 102483 - 102737 (+)
Gene ID: Rep_1939_c_0_85
Type: TC
Location: 102865 - 103866 (+)
Gene ID: Rep_1939_c_0_86
Type:
Location: 104003 - 104629 (-)
Gene ID: Rep_1939_c_0_87
Type: pfam
Location: 104649 - 105536 (-)
Gene ID: Rep_1939_c_0_88
Type: TC
Location: 105608 - 106516 (-)
Gene ID: Rep_1939_c_0_89
Type: STP
Location: 106653 - 111215 (-)
Gene ID: Rep_1939_c_0_90
Type: pfam
Location: 111402 - 112082 (-)
Gene ID: Rep_1939_c_0_91
Type: CAZyme
Location: 112098 - 113708 (-)
Gene ID: Rep_1939_c_0_92
Type: CAZyme
Location: 113718 - 115277 (-)
Gene ID: Rep_1939_c_0_93
Type: TC
Location: 115274 - 115867 (-)
Gene ID: Rep_1939_c_0_94
Type:
Location: 115956 - 116912 (-)
Gene ID: Rep_1939_c_0_95
Type: TC
Location: 117328 - 118047 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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