Cluster: Rep_1939_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1939_c_1 | Rep_1939_c_1_1951 | 2066276 | 2067685 | - | 1.B.23.1.18 |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_1952 | 2067703 | 2068482 | - | S6PP | Hydrolase_3 |
| CAZyme | Rep_1939_c_1 | Rep_1939_c_1_1953 | 2068494 | 2070161 | - | GH13_31 |
| TC | Rep_1939_c_1 | Rep_1939_c_1_1954 | 2070171 | 2072333 | - | 4.A.1.1.8 |
Gene ID: Rep_1939_c_1_1951
Type: TC
Location: 2066276 - 2067685 (-)
Type: TC
Location: 2066276 - 2067685 (-)
Gene ID: Rep_1939_c_1_1952
Type: pfam
Location: 2067703 - 2068482 (-)
Type: pfam
Location: 2067703 - 2068482 (-)
Gene ID: Rep_1939_c_1_1953
Type: CAZyme
Location: 2068494 - 2070161 (-)
Type: CAZyme
Location: 2068494 - 2070161 (-)
Gene ID: Rep_1939_c_1_1954
Type: TC
Location: 2070171 - 2072333 (-)
Type: TC
Location: 2070171 - 2072333 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.