Cluster: Rep_1939_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1939_c_1 | Rep_1939_c_1_1923 | 2034605 | 2035441 | + | 3.A.1.132.3 |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_1924 | 2035537 | 2037381 | - | Alk_phosphatase |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_1925 | 2037507 | 2038385 | + | ROK |
| CAZyme | Rep_1939_c_1 | Rep_1939_c_1_1926 | 2038458 | 2039615 | - | CE9 |
Gene ID: Rep_1939_c_1_1923
Type: TC
Location: 2034605 - 2035441 (+)
Type: TC
Location: 2034605 - 2035441 (+)
Gene ID: Rep_1939_c_1_1924
Type: pfam
Location: 2035537 - 2037381 (-)
Type: pfam
Location: 2035537 - 2037381 (-)
Gene ID: Rep_1939_c_1_1925
Type: pfam
Location: 2037507 - 2038385 (+)
Type: pfam
Location: 2037507 - 2038385 (+)
Gene ID: Rep_1939_c_1_1926
Type: CAZyme
Location: 2038458 - 2039615 (-)
Type: CAZyme
Location: 2038458 - 2039615 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.