Cluster: Rep_1939_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1939_c_1 | Rep_1939_c_1_1595 | 1677714 | 1679099 | - | 2.A.25.1.4 |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_1596 | 1679465 | 1679857 | - | dCMP_cyt_deam_1 | dCMP_cyt_deam_2 |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_1597 | 1679854 | 1680615 | - | SurE |
| CAZyme | Rep_1939_c_1 | Rep_1939_c_1_1598 | 1680627 | 1681877 | - | GT2 |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_1599 | 1681898 | 1682569 | - | CDP-OH_P_transf |
| pfam | Rep_1939_c_1 | Rep_1939_c_1_1600 | 1682566 | 1683219 | - | PS_Dcarbxylase |
| CAZyme | Rep_1939_c_1 | Rep_1939_c_1_1601 | 1683234 | 1683965 | - | GT26 |
Gene ID: Rep_1939_c_1_1595
Type: TC
Location: 1677714 - 1679099 (-)
Type: TC
Location: 1677714 - 1679099 (-)
Gene ID: Rep_1939_c_1_1596
Type: pfam
Location: 1679465 - 1679857 (-)
Type: pfam
Location: 1679465 - 1679857 (-)
Gene ID: Rep_1939_c_1_1597
Type: pfam
Location: 1679854 - 1680615 (-)
Type: pfam
Location: 1679854 - 1680615 (-)
Gene ID: Rep_1939_c_1_1598
Type: CAZyme
Location: 1680627 - 1681877 (-)
Type: CAZyme
Location: 1680627 - 1681877 (-)
Gene ID: Rep_1939_c_1_1599
Type: pfam
Location: 1681898 - 1682569 (-)
Type: pfam
Location: 1681898 - 1682569 (-)
Gene ID: Rep_1939_c_1_1600
Type: pfam
Location: 1682566 - 1683219 (-)
Type: pfam
Location: 1682566 - 1683219 (-)
Gene ID: Rep_1939_c_1_1601
Type: CAZyme
Location: 1683234 - 1683965 (-)
Type: CAZyme
Location: 1683234 - 1683965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.