Cluster: Rep_1935_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1935
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1935_c_0 | Rep_1935_c_0_895 | 951250 | 952191 | - | GT2 |
| pfam | Rep_1935_c_0 | Rep_1935_c_0_896 | 952273 | 952596 | - | Thioredoxin | Thioredoxin_2 |
| pfam | Rep_1935_c_0 | Rep_1935_c_0_897 | 952786 | 953961 | - | AICARFT_IMPCHas |
| CAZyme | Rep_1935_c_0 | Rep_1935_c_0_898 | 954127 | 955077 | - | GT2 |
| TC | Rep_1935_c_0 | Rep_1935_c_0_899 | 955119 | 955784 | - | 1.A.62.2.1 |
Gene ID: Rep_1935_c_0_895
Type: CAZyme
Location: 951250 - 952191 (-)
Type: CAZyme
Location: 951250 - 952191 (-)
Gene ID: Rep_1935_c_0_896
Type: pfam
Location: 952273 - 952596 (-)
Type: pfam
Location: 952273 - 952596 (-)
Gene ID: Rep_1935_c_0_897
Type: pfam
Location: 952786 - 953961 (-)
Type: pfam
Location: 952786 - 953961 (-)
Gene ID: Rep_1935_c_0_898
Type: CAZyme
Location: 954127 - 955077 (-)
Type: CAZyme
Location: 954127 - 955077 (-)
Gene ID: Rep_1935_c_0_899
Type: TC
Location: 955119 - 955784 (-)
Type: TC
Location: 955119 - 955784 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp900549385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.