Cluster: Rep_1935_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1935
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1935_c_0 | Rep_1935_c_0_850 | 899744 | 900382 | - | GT28 |
| pfam | Rep_1935_c_0 | Rep_1935_c_0_851 | 900405 | 900875 | - | Glyco_transf_28 |
| pfam | Rep_1935_c_0 | Rep_1935_c_0_852 | 900901 | 902265 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1935_c_0 | Rep_1935_c_0_853 | 902297 | 903109 | - | 9.B.146.1.6 |
Gene ID: Rep_1935_c_0_850
Type: CAZyme
Location: 899744 - 900382 (-)
Type: CAZyme
Location: 899744 - 900382 (-)
Gene ID: Rep_1935_c_0_851
Type: pfam
Location: 900405 - 900875 (-)
Type: pfam
Location: 900405 - 900875 (-)
Gene ID: Rep_1935_c_0_852
Type: pfam
Location: 900901 - 902265 (-)
Type: pfam
Location: 900901 - 902265 (-)
Gene ID: Rep_1935_c_0_853
Type: TC
Location: 902297 - 903109 (-)
Type: TC
Location: 902297 - 903109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp900549385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.