Cluster: Rep_1935_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1935
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1935_c_0 | Rep_1935_c_0_25 | 32194 | 33444 | + | 2.A.23.4.1 |
| pfam | Rep_1935_c_0 | Rep_1935_c_0_26 | 33430 | 33870 | - | COesterase |
| STP | Rep_1935_c_0 | Rep_1935_c_0_27 | 34166 | 35314 | + | Fer4 |
| CAZyme | Rep_1935_c_0 | Rep_1935_c_0_28 | 35472 | 36557 | - | GH170 |
| TC | Rep_1935_c_0 | Rep_1935_c_0_29 | 36572 | 37402 | - | 4.A.1.2.7 |
Gene ID: Rep_1935_c_0_25
Type: TC
Location: 32194 - 33444 (+)
Type: TC
Location: 32194 - 33444 (+)
Gene ID: Rep_1935_c_0_26
Type: pfam
Location: 33430 - 33870 (-)
Type: pfam
Location: 33430 - 33870 (-)
Gene ID: Rep_1935_c_0_27
Type: STP
Location: 34166 - 35314 (+)
Type: STP
Location: 34166 - 35314 (+)
Gene ID: Rep_1935_c_0_28
Type: CAZyme
Location: 35472 - 36557 (-)
Type: CAZyme
Location: 35472 - 36557 (-)
Gene ID: Rep_1935_c_0_29
Type: TC
Location: 36572 - 37402 (-)
Type: TC
Location: 36572 - 37402 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp900549385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.