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Cluster: Rep_1932_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1932_c_1 Rep_1932_c_1_82 85145 86389 - 2.A.66.2.10
pfam Rep_1932_c_1 Rep_1932_c_1_83 86398 88296 - Hydrolase
CAZyme Rep_1932_c_1 Rep_1932_c_1_84 88323 89468 - GT4
CAZyme Rep_1932_c_1 Rep_1932_c_1_85 89509 90600 - GT2
CAZyme Rep_1932_c_1 Rep_1932_c_1_86 90604 91365 - GT111
pfam Rep_1932_c_1 Rep_1932_c_1_87 91365 92468 - Amino_oxidase | GLF | NAD_binding_8
TC Rep_1932_c_1 Rep_1932_c_1_88 92468 93901 - 9.B.18.1.2
NULL(UNKNOWN) Rep_1932_c_1 Rep_1932_c_1_89 94063 95595 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_1932_c_1 Rep_1932_c_1_90 95663 97147 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1932_c_1 Rep_1932_c_1_91 97166 98098 - GT2
Gene ID: Rep_1932_c_1_82
Type: TC
Location: 85145 - 86389 (-)
Gene ID: Rep_1932_c_1_83
Type: pfam
Location: 86398 - 88296 (-)
Gene ID: Rep_1932_c_1_84
Type: CAZyme
Location: 88323 - 89468 (-)
Gene ID: Rep_1932_c_1_85
Type: CAZyme
Location: 89509 - 90600 (-)
Gene ID: Rep_1932_c_1_86
Type: CAZyme
Location: 90604 - 91365 (-)
Gene ID: Rep_1932_c_1_87
Type: pfam
Location: 91365 - 92468 (-)
Gene ID: Rep_1932_c_1_88
Type: TC
Location: 92468 - 93901 (-)
Gene ID: Rep_1932_c_1_89
Type:
Location: 94063 - 95595 (-)
Gene ID: Rep_1932_c_1_90
Type:
Location: 95663 - 97147 (-)
Gene ID: Rep_1932_c_1_91
Type: CAZyme
Location: 97166 - 98098 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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