PROTEIN: Rep_1932_c_1_90
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Protein File & Metadata
Source:
Rep_1932_c_1_90.pdb
Genome ID:
Protein ID:
Rep_1932_c_1_90
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Protein Sequence
MFSSISIQNK KGFWIGLWVF STYFIFFLLQ AVHNYPVKIA KQIVSIQVIV GTSVFLFICI 60 TYLLVRYISG INSKGIGTKE LFYLFMSLGI ASFLYFAILS RGYTFLTVLH TDPKDIFMDF 120 INSAGVGSNP YEKGVIYPPL VNVFYVSIGR FLDFSQCATD VRNSQMGLLL YTFYNFFALS 180 ILYRQVKQFR STVNLNETEH TFLFVLMIFS IPMLYLIERG NSVLLALIAT MYFVQHYSSG 240 NKVCRYKAYL ALAVAGSIKI APFILGAVLI RKVSFKELIY AAGICLGVFL LPFIVTHGSP 300 LDLLHNIMDA TKLFQGKILT SDGQCISLGY GVFVNSYNFY QAFERLTAIH ITGVGRWLDI 360 IGFITTSVIV SFNNRLDEYY KITLLILLII LFPGFSNIYN LVYIFIPLIL LLNKYDSEAD 420 MKYGIFFILL LFIFIPVYNM PMDWLSVYVS DKYPLTISTV MESVSCIILF LYVYIQSITI 480 TYKQFKWKFK KNIS 494
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71787-F1-model_v4 | 35 | 486 | 2 | 554 | 0.6078 |
0.7337 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0G3H749-F1-model_v4 | GT87 | 71 | 491 | 2 | 371 | 0.6763 |
0.79 |
| QLE57521.1 | GT87 | 24 | 484 | 2 | 422 | 0.6681 |
0.7424 |
| AF-A0A806GJ18-F1-model_v4 | GT87 | 71 | 483 | 3 | 370 | 0.6627 |
0.791 |
| AF-A0A5Q3Q0X8-F1-model_v4 | GT87 | 67 | 494 | 6 | 409 | 0.6454 |
0.7322 |
| AF-F4CN20-F1-model_v4 | GT87 | 6 | 490 | 8 | 406 | 0.6446 |
0.7399 |
| AF-A0A7Z2GD97-F1-model_v4 | GT87 | 69 | 494 | 19 | 447 | 0.6424 |
0.7212 |
| A0A496MXI4 | GT87 | 71 | 486 | 1 | 373 | 0.642 |
0.7882 |
| AF-A0A1X2E1C5-F1-model_v4 | GT0 | 1 | 491 | 22 | 414 | 0.6395 |
0.7594 |
| AF-A0A5J6U7R8-F1-model_v4 | GT87 | 8 | 488 | 7 | 410 | 0.6383 |
0.7371 |
| AF-A0A1G9X4N8-F1-model_v4 | GT87 | 6 | 481 | 3 | 394 | 0.6338 |
0.7339 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QLE57521.1 | GT87 | 24 | 484 | 2 | 422 | 0.6681 |
0.7424 |
| A0A1D8D3R3 | GT87 | 35 | 487 | 1 | 482 | 0.6642 |
0.733 |
| QKT09273.1 | GT87 | 72 | 490 | 1 | 414 | 0.6578 |
0.7421 |
| A0A2J7W7Q3 | GT87 | 37 | 488 | 1 | 477 | 0.6508 |
0.7214 |
| A0A7Z2G2E1 | GT87 | 1 | 480 | 13 | 426 | 0.6437 |
0.732 |
| A0A7Z2GD97 | GT87 | 69 | 494 | 19 | 447 | 0.6424 |
0.7212 |
| A0A496MXI4 | GT87 | 71 | 486 | 1 | 373 | 0.642 |
0.7882 |
| A0A5J6U7R8 | GT87 | 8 | 488 | 7 | 410 | 0.6383 |
0.7371 |
| A0A1G9X4N8 | GT87 | 6 | 481 | 3 | 394 | 0.6338 |
0.7339 |
| A0A8I0CNE2 | GT87 | 6 | 494 | 26 | 462 | 0.6323 |
0.7057 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0QW28-F1-model_v4 | 69 | 490 | 26 | 413 | 0.6317 |
0.7573 |
| AF-Q8NNM0-F1-model_v4 | 34 | 465 | 34 | 464 | 0.5632 |
0.6477 |