Cluster: Rep_1863_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1863
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1863_c_2 | Rep_1863_c_2_27 | 23902 | 24441 | + | GH23 |
| NULL(UNKNOWN) | Rep_1863_c_2 | Rep_1863_c_2_28 | 25064 | 25753 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1863_c_2 | Rep_1863_c_2_29 | 26425 | 27114 | - | 9.B.120.1.2 |
| pfam | Rep_1863_c_2 | Rep_1863_c_2_30 | 27237 | 27851 | + | DUF3298 | PdaC |
| TC | Rep_1863_c_2 | Rep_1863_c_2_31 | 28010 | 28441 | - | 3.A.11.1.4 |
Gene ID: Rep_1863_c_2_27
Type: CAZyme
Location: 23902 - 24441 (+)
Type: CAZyme
Location: 23902 - 24441 (+)
Gene ID: Rep_1863_c_2_28
Type:
Location: 25064 - 25753 (-)
Type:
Location: 25064 - 25753 (-)
Gene ID: Rep_1863_c_2_29
Type: TC
Location: 26425 - 27114 (-)
Type: TC
Location: 26425 - 27114 (-)
Gene ID: Rep_1863_c_2_30
Type: pfam
Location: 27237 - 27851 (+)
Type: pfam
Location: 27237 - 27851 (+)
Gene ID: Rep_1863_c_2_31
Type: TC
Location: 28010 - 28441 (-)
Type: TC
Location: 28010 - 28441 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.