dbCAN Logo

PROTEIN: Rep_1863_c_2_28

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_1863_c_2_28.pdb
Genome ID:
Rep_1863
Protein ID:
Rep_1863_c_2_28

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MPYPPSHKLD   IVLNDLRSEA   EQKKFCYHLV   EEVPGLVAIS   LQNTLVPPSS   TDVIELSSIK 60
NMPCILIADK   NSQEQEKLFY   RCILNFNGNF   LIAKDLPSAL   AMLINNEGFM   PISSNSSVSN 120
FIGEFSRLAQ   LYDNGEPIHF   KYCAFWNKNA   DTKLLEPIMQ   KLAQAYLDVL   ATTPTNWTPW 180
VCALLTRKRM   SLAVYNSLPA   LCLSSSCWLL   QSTLLCLLLL   PAPYCLTVL 229
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9HY39-F1-model_v4 1 173 128 299 0.5109 0.7738
AF-Q5F5A2-F1-model_v4 1 171 134 301 0.5043 0.7825
AF-P44418-F1-model_v4 1 175 128 300 0.5028 0.7511
AF-P45349-F1-model_v4 1 171 135 302 0.5007 0.7762
AF-X8FLE8-F1-model_v4 1 222 58 244 0.5007 0.6529
AF-K0F8R7-F1-model_v4 1 175 134 302 0.4995 0.7626
AF-Q9HYH2-F1-model_v4 1 171 130 293 0.4969 0.7741
AF-Q32A06-F1-model_v4 1 175 129 294 0.4966 0.7867
AF-A0A0H3GK98-F1-model_v4 1 171 129 297 0.4956 0.759
AF-P52678-F1-model_v4 1 173 136 305 0.4949 0.7598
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0G9F7H9 GH73 1 170 129 293 0.4899 0.7543
AF-A0A6I6CWW9-F1-model_v4 GH23 1 224 115 481 0.4839 0.6834
AF-A0A220SJG2-F1-model_v4 GH23 1 224 88 455 0.4824 0.6708
A0A413IHU7 GH23 1 225 90 457 0.4823 0.6652
QYX58489.1 CBM50 1 180 143 340 0.4818 0.7274
AF-A0A6C0U492-F1-model_v4 GH23 1 225 80 452 0.4815 0.6716
AF-A0A1H2M189-F1-model_v4 GH23 1 223 68 433 0.4788 0.6683
AF-A0A7R7AIK5-F1-model_v4 GH23 1 219 85 371 0.4766 0.6688
AF-Q0A9T8-F1-model_v4 GH23 1 219 85 370 0.4724 0.6613
AF-E4PGR6-F1-model_v4 GH23 1 219 90 377 0.4718 0.6637
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0G9F7H9 GH73 1 170 129 293 0.4899 0.7543
A0A6I6CWW9 GH23 1 224 115 481 0.4839 0.6834
UZP75243.1 GH23 1 224 76 446 0.4824 0.673
A0A413IHU7 GH23 1 225 90 457 0.4823 0.6652
QYX58489.1 CBM50 1 180 143 340 0.4818 0.7274
A0A6C0U492 GH23 1 225 80 452 0.4815 0.6716
A0A7D7VJR0 GH23 1 223 89 451 0.4735 0.6607
A0A6C0GKB0 GH23 1 224 112 483 0.4731 0.6678
UTW65919.1 GH23 1 225 96 477 0.4683 0.6551
A0A1Y1CJ59 GH23 1 224 96 466 0.4669 0.6517
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4ab6-assembly1.cif.gz_B 1 175 8 203 0.594 0.7545
4ab6-assembly1.cif.gz_A 1 172 40 207 0.5886 0.7833
4ab5-assembly1.cif.gz_A 1 175 42 210 0.5843 0.7767
1i69-assembly1.cif.gz_B 1 171 43 204 0.5768 0.7785
2ql3-assembly1.cif.gz_A 1 164 41 205 0.5649 0.7541
1i6a-assembly1.cif.gz_A 1 171 43 210 0.5606 0.7428
4y0m-assembly3.cif.gz_E 1 170 41 200 0.5589 0.7541
4y0m-assembly1.cif.gz_A 1 170 42 203 0.5586 0.7505
1ii5-assembly1.cif.gz_A 1 175 49 221 0.556 0.7324
7w08-assembly2.cif.gz_A 1 164 44 204 0.555 0.7511
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P54952-F1-model_v4 1 175 81 255 0.5139 0.7213
AF-P52693-F1-model_v4 1 178 127 309 0.5047 0.7417
AF-P44418-F1-model_v4 1 175 128 300 0.5028 0.7511
AF-P45349-F1-model_v4 1 171 135 302 0.5007 0.7762
AF-P71318-F1-model_v4 1 174 129 300 0.5006 0.7521
AF-Q9X725-F1-model_v4 1 176 128 303 0.5 0.7382
AF-Q47005-F1-model_v4 1 178 131 305 0.4989 0.7419
AF-P0ACQ6-F1-model_v4 1 171 129 297 0.4961 0.7602
AF-P0ACQ4-F1-model_v4 1 171 129 297 0.496 0.76
AF-O34852-F1-model_v4 1 175 88 262 0.4954 0.701
Download Full SwissProt Results