Cluster: Rep_185_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_185_c_1 | Rep_185_c_1_2594 | 3088941 | 3092549 | - | 3.A.1.201.12 |
| pfam | Rep_185_c_1 | Rep_185_c_1_2595 | 3092706 | 3093692 | - | DDE_Tnp_IS1595 |
| STP | Rep_185_c_1 | Rep_185_c_1_2596 | 3093927 | 3094538 | - | TetR_N |
| CAZyme | Rep_185_c_1 | Rep_185_c_1_2597 | 3094982 | 3095956 | - | CE8 |
| STP | Rep_185_c_1 | Rep_185_c_1_2598 | 3095986 | 3098256 | - | ACT | HD |
| CAZyme | Rep_185_c_1 | Rep_185_c_1_2599 | 3098318 | 3099634 | - | GH23 |
Gene ID: Rep_185_c_1_2594
Type: TC
Location: 3088941 - 3092549 (-)
Type: TC
Location: 3088941 - 3092549 (-)
Gene ID: Rep_185_c_1_2595
Type: pfam
Location: 3092706 - 3093692 (-)
Type: pfam
Location: 3092706 - 3093692 (-)
Gene ID: Rep_185_c_1_2596
Type: STP
Location: 3093927 - 3094538 (-)
Type: STP
Location: 3093927 - 3094538 (-)
Gene ID: Rep_185_c_1_2597
Type: CAZyme
Location: 3094982 - 3095956 (-)
Type: CAZyme
Location: 3094982 - 3095956 (-)
Gene ID: Rep_185_c_1_2598
Type: STP
Location: 3095986 - 3098256 (-)
Type: STP
Location: 3095986 - 3098256 (-)
Gene ID: Rep_185_c_1_2599
Type: CAZyme
Location: 3098318 - 3099634 (-)
Type: CAZyme
Location: 3098318 - 3099634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.