Cluster: Rep_185_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_185_c_1 | Rep_185_c_1_2175 | 2610917 | 2613967 | + | 1.B.14.6.1 |
| pfam | Rep_185_c_1 | Rep_185_c_1_2176 | 2614065 | 2615783 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_185_c_1 | Rep_185_c_1_2177 | 2615874 | 2617064 | + | DUF4960 |
| CAZyme | Rep_185_c_1 | Rep_185_c_1_2178 | 2617301 | 2619760 | + | GH32 |
| CAZyme | Rep_185_c_1 | Rep_185_c_1_2179 | 2619978 | 2621768 | + | GH32 |
| TC | Rep_185_c_1 | Rep_185_c_1_2180 | 2621904 | 2623061 | + | 2.A.1.7.17 |
Gene ID: Rep_185_c_1_2175
Type: TC
Location: 2610917 - 2613967 (+)
Type: TC
Location: 2610917 - 2613967 (+)
Gene ID: Rep_185_c_1_2176
Type: pfam
Location: 2614065 - 2615783 (+)
Type: pfam
Location: 2614065 - 2615783 (+)
Gene ID: Rep_185_c_1_2177
Type: pfam
Location: 2615874 - 2617064 (+)
Type: pfam
Location: 2615874 - 2617064 (+)
Gene ID: Rep_185_c_1_2178
Type: CAZyme
Location: 2617301 - 2619760 (+)
Type: CAZyme
Location: 2617301 - 2619760 (+)
Gene ID: Rep_185_c_1_2179
Type: CAZyme
Location: 2619978 - 2621768 (+)
Type: CAZyme
Location: 2619978 - 2621768 (+)
Gene ID: Rep_185_c_1_2180
Type: TC
Location: 2621904 - 2623061 (+)
Type: TC
Location: 2621904 - 2623061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.