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Cluster: Rep_185_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_185_c_1 Rep_185_c_1_120 141342 142685 - CBM50
pfam Rep_185_c_1 Rep_185_c_1_121 143463 144101 + DUF4468
NULL(UNKNOWN) Rep_185_c_1 Rep_185_c_1_122 144136 144366 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_185_c_1 Rep_185_c_1_123 144363 146708 + 1.B.14.15.2
STP Rep_185_c_1 Rep_185_c_1_124 146775 147980 + Aminotran_1_2
TC Rep_185_c_1 Rep_185_c_1_125 147977 149224 + 3.A.1.125.5
STP Rep_185_c_1 Rep_185_c_1_126 149299 149925 - Nitroreductase
TC Rep_185_c_1 Rep_185_c_1_127 150230 151240 - 3.A.1.13.2
TC Rep_185_c_1 Rep_185_c_1_128 151255 152433 - 3.A.1.13.2
Gene ID: Rep_185_c_1_120
Type: CAZyme
Location: 141342 - 142685 (-)
Gene ID: Rep_185_c_1_121
Type: pfam
Location: 143463 - 144101 (+)
Gene ID: Rep_185_c_1_122
Type:
Location: 144136 - 144366 (+)
Gene ID: Rep_185_c_1_123
Type: TC
Location: 144363 - 146708 (+)
Gene ID: Rep_185_c_1_124
Type: STP
Location: 146775 - 147980 (+)
Gene ID: Rep_185_c_1_125
Type: TC
Location: 147977 - 149224 (+)
Gene ID: Rep_185_c_1_126
Type: STP
Location: 149299 - 149925 (-)
Gene ID: Rep_185_c_1_127
Type: TC
Location: 150230 - 151240 (-)
Gene ID: Rep_185_c_1_128
Type: TC
Location: 151255 - 152433 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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