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Cluster: Rep_177_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_177_c_0 Rep_177_c_0_727 834793 837906 - 2.A.6.1.5
TC Rep_177_c_0 Rep_177_c_0_728 837929 839098 - 2.A.6.2.20
TC Rep_177_c_0 Rep_177_c_0_729 839912 842500 + 3.A.9.1.2
TC Rep_177_c_0 Rep_177_c_0_730 842746 843321 - 2.A.107.1.2
pfam Rep_177_c_0 Rep_177_c_0_731 843723 844991 + HI0933_like | HI0933_like_1st
peptidase Rep_177_c_0 Rep_177_c_0_732 845223 847343 - M06.UPW
TC Rep_177_c_0 Rep_177_c_0_733 847452 849566 + 2.A.67.4.2
pfam Rep_177_c_0 Rep_177_c_0_734 850277 852979 - UvrD-helicase | RNase_T | AAA_19 | UvrD_C | UvrD_C_2
sulfatase Rep_177_c_0 Rep_177_c_0_735 853235 854026 - S1_9
CAZyme Rep_177_c_0 Rep_177_c_0_736 854104 855732 - GH20
Gene ID: Rep_177_c_0_727
Type: TC
Location: 834793 - 837906 (-)
Gene ID: Rep_177_c_0_728
Type: TC
Location: 837929 - 839098 (-)
Gene ID: Rep_177_c_0_729
Type: TC
Location: 839912 - 842500 (+)
Gene ID: Rep_177_c_0_730
Type: TC
Location: 842746 - 843321 (-)
Gene ID: Rep_177_c_0_731
Type: pfam
Location: 843723 - 844991 (+)
Gene ID: Rep_177_c_0_732
Type: peptidase
Location: 845223 - 847343 (-)
Gene ID: Rep_177_c_0_733
Type: TC
Location: 847452 - 849566 (+)
Gene ID: Rep_177_c_0_734
Type: pfam
Location: 850277 - 852979 (-)
Gene ID: Rep_177_c_0_735
Type: sulfatase
Location: 853235 - 854026 (-)
Gene ID: Rep_177_c_0_736
Type: CAZyme
Location: 854104 - 855732 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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