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Cluster: Rep_177_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_177_c_0 Rep_177_c_0_2670 3226068 3227036 - GT2
NULL(UNKNOWN) Rep_177_c_0 Rep_177_c_0_2671 3227129 3227428 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_177_c_0 Rep_177_c_0_2672 3227406 3228860 + 2.A.62.1.3
pfam Rep_177_c_0 Rep_177_c_0_2673 3228877 3229854 + PFK
TC Rep_177_c_0 Rep_177_c_0_2674 3229985 3231514 + 3.A.2.1.2
pfam Rep_177_c_0 Rep_177_c_0_2675 3231530 3231775 + ATP-synt_DE_N
NULL(UNKNOWN) Rep_177_c_0 Rep_177_c_0_2676 3231791 3232186 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_177_c_0 Rep_177_c_0_2677 3232246 3233271 + 3.A.2.1.7
Gene ID: Rep_177_c_0_2670
Type: CAZyme
Location: 3226068 - 3227036 (-)
Gene ID: Rep_177_c_0_2671
Type:
Location: 3227129 - 3227428 (+)
Gene ID: Rep_177_c_0_2672
Type: TC
Location: 3227406 - 3228860 (+)
Gene ID: Rep_177_c_0_2673
Type: pfam
Location: 3228877 - 3229854 (+)
Gene ID: Rep_177_c_0_2674
Type: TC
Location: 3229985 - 3231514 (+)
Gene ID: Rep_177_c_0_2675
Type: pfam
Location: 3231530 - 3231775 (+)
Gene ID: Rep_177_c_0_2676
Type:
Location: 3231791 - 3232186 (+)
Gene ID: Rep_177_c_0_2677
Type: TC
Location: 3232246 - 3233271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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