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Cluster: Rep_177_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_177_c_0 Rep_177_c_0_860 1012643 1013728 + 2.A.6.2.28
TC Rep_177_c_0 Rep_177_c_0_861 1013750 1016788 + 2.A.6.2.33
pfam Rep_177_c_0 Rep_177_c_0_862 1016778 1018154 + OEP | OEP
pfam Rep_177_c_0 Rep_177_c_0_863 1018170 1018856 + Lipase_GDSL_lke
CAZyme Rep_177_c_0 Rep_177_c_0_864 1019173 1021110 - GH97
CAZyme Rep_177_c_0 Rep_177_c_0_865 1021245 1023548 - GH92
NULL(UNKNOWN) Rep_177_c_0 Rep_177_c_0_866 1023759 1023935 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_177_c_0 Rep_177_c_0_867 1024908 1027490 - GH78
Gene ID: Rep_177_c_0_860
Type: TC
Location: 1012643 - 1013728 (+)
Gene ID: Rep_177_c_0_861
Type: TC
Location: 1013750 - 1016788 (+)
Gene ID: Rep_177_c_0_862
Type: pfam
Location: 1016778 - 1018154 (+)
Gene ID: Rep_177_c_0_863
Type: pfam
Location: 1018170 - 1018856 (+)
Gene ID: Rep_177_c_0_864
Type: CAZyme
Location: 1019173 - 1021110 (-)
Gene ID: Rep_177_c_0_865
Type: CAZyme
Location: 1021245 - 1023548 (-)
Gene ID: Rep_177_c_0_866
Type:
Location: 1023759 - 1023935 (-)
Gene ID: Rep_177_c_0_867
Type: CAZyme
Location: 1024908 - 1027490 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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