Cluster: Rep_171_CGC43
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_171
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_171_c_2 | Rep_171_c_2_809 | 977082 | 980297 | - | GH2 |
| pfam | Rep_171_c_2 | Rep_171_c_2_810 | 980408 | 981106 | - | DUF2461 |
| pfam | Rep_171_c_2 | Rep_171_c_2_811 | 981231 | 981872 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| CAZyme | Rep_171_c_2 | Rep_171_c_2_812 | 981869 | 984565 | - | CBM20 | GH77 |
| pfam | Rep_171_c_2 | Rep_171_c_2_813 | 984686 | 985711 | + | YceG |
| CAZyme | Rep_171_c_2 | Rep_171_c_2_814 | 986246 | 990475 | - | CBM32 | CBM32 | GH81 |
| CAZyme | Rep_171_c_2 | Rep_171_c_2_815 | 990723 | 992783 | - | CBM32 |
| NULL(UNKNOWN) | Rep_171_c_2 | Rep_171_c_2_816 | 993579 | 993767 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_171_c_2 | Rep_171_c_2_817 | 993805 | 996993 | - | CBM32 |
| CAZyme | Rep_171_c_2 | Rep_171_c_2_818 | 997056 | 998564 | - | GH128 |
| CAZyme | Rep_171_c_2 | Rep_171_c_2_819 | 998607 | 1001870 | - | GH16_3 |
| NULL(UNKNOWN) | Rep_171_c_2 | Rep_171_c_2_820 | 1002006 | 1002962 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_171_c_2 | Rep_171_c_2_821 | 1003197 | 1006091 | + | Y_Y_Y |
| TC | Rep_171_c_2 | Rep_171_c_2_822 | 1006375 | 1007640 | - | 3.D.5.1.1 |
| TC | Rep_171_c_2 | Rep_171_c_2_823 | 1007664 | 1008290 | - | 3.D.5.1.1 |
| TC | Rep_171_c_2 | Rep_171_c_2_824 | 1008293 | 1008919 | - | 3.D.5.1.1 |
| TC | Rep_171_c_2 | Rep_171_c_2_825 | 1008934 | 1009677 | - | 3.D.5.1.1 |
| TC | Rep_171_c_2 | Rep_171_c_2_826 | 1009683 | 1010846 | - | 3.D.5.1.1 |
Gene ID: Rep_171_c_2_809
Type: CAZyme
Location: 977082 - 980297 (-)
Type: CAZyme
Location: 977082 - 980297 (-)
Gene ID: Rep_171_c_2_810
Type: pfam
Location: 980408 - 981106 (-)
Type: pfam
Location: 980408 - 981106 (-)
Gene ID: Rep_171_c_2_811
Type: pfam
Location: 981231 - 981872 (-)
Type: pfam
Location: 981231 - 981872 (-)
Gene ID: Rep_171_c_2_812
Type: CAZyme
Location: 981869 - 984565 (-)
Type: CAZyme
Location: 981869 - 984565 (-)
Gene ID: Rep_171_c_2_813
Type: pfam
Location: 984686 - 985711 (+)
Type: pfam
Location: 984686 - 985711 (+)
Gene ID: Rep_171_c_2_814
Type: CAZyme
Location: 986246 - 990475 (-)
Type: CAZyme
Location: 986246 - 990475 (-)
Gene ID: Rep_171_c_2_815
Type: CAZyme
Location: 990723 - 992783 (-)
Type: CAZyme
Location: 990723 - 992783 (-)
Gene ID: Rep_171_c_2_816
Type:
Location: 993579 - 993767 (-)
Type:
Location: 993579 - 993767 (-)
Gene ID: Rep_171_c_2_817
Type: CAZyme
Location: 993805 - 996993 (-)
Type: CAZyme
Location: 993805 - 996993 (-)
Gene ID: Rep_171_c_2_818
Type: CAZyme
Location: 997056 - 998564 (-)
Type: CAZyme
Location: 997056 - 998564 (-)
Gene ID: Rep_171_c_2_819
Type: CAZyme
Location: 998607 - 1001870 (-)
Type: CAZyme
Location: 998607 - 1001870 (-)
Gene ID: Rep_171_c_2_820
Type:
Location: 1002006 - 1002962 (-)
Type:
Location: 1002006 - 1002962 (-)
Gene ID: Rep_171_c_2_821
Type: STP
Location: 1003197 - 1006091 (+)
Type: STP
Location: 1003197 - 1006091 (+)
Gene ID: Rep_171_c_2_822
Type: TC
Location: 1006375 - 1007640 (-)
Type: TC
Location: 1006375 - 1007640 (-)
Gene ID: Rep_171_c_2_823
Type: TC
Location: 1007664 - 1008290 (-)
Type: TC
Location: 1007664 - 1008290 (-)
Gene ID: Rep_171_c_2_824
Type: TC
Location: 1008293 - 1008919 (-)
Type: TC
Location: 1008293 - 1008919 (-)
Gene ID: Rep_171_c_2_825
Type: TC
Location: 1008934 - 1009677 (-)
Type: TC
Location: 1008934 - 1009677 (-)
Gene ID: Rep_171_c_2_826
Type: TC
Location: 1009683 - 1010846 (-)
Type: TC
Location: 1009683 - 1010846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.