Cluster: Rep_171_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_171
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_171_c_1 | Rep_171_c_1_1427 | 1893842 | 1897003 | + | 1.B.14.6.1 |
| pfam | Rep_171_c_1 | Rep_171_c_1_1428 | 1897046 | 1898623 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_1429 | 1898651 | 1900015 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1430 | 1900111 | 1901355 | + | GH16_3 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1431 | 1901554 | 1902786 | + | GH5_46 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1432 | 1903572 | 1905809 | + | GH3 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1433 | 1905973 | 1908246 | + | GH3 |
Gene ID: Rep_171_c_1_1427
Type: TC
Location: 1893842 - 1897003 (+)
Type: TC
Location: 1893842 - 1897003 (+)
Gene ID: Rep_171_c_1_1428
Type: pfam
Location: 1897046 - 1898623 (+)
Type: pfam
Location: 1897046 - 1898623 (+)
Gene ID: Rep_171_c_1_1429
Type:
Location: 1898651 - 1900015 (+)
Type:
Location: 1898651 - 1900015 (+)
Gene ID: Rep_171_c_1_1430
Type: CAZyme
Location: 1900111 - 1901355 (+)
Type: CAZyme
Location: 1900111 - 1901355 (+)
Gene ID: Rep_171_c_1_1431
Type: CAZyme
Location: 1901554 - 1902786 (+)
Type: CAZyme
Location: 1901554 - 1902786 (+)
Gene ID: Rep_171_c_1_1432
Type: CAZyme
Location: 1903572 - 1905809 (+)
Type: CAZyme
Location: 1903572 - 1905809 (+)
Gene ID: Rep_171_c_1_1433
Type: CAZyme
Location: 1905973 - 1908246 (+)
Type: CAZyme
Location: 1905973 - 1908246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.