Cluster: Rep_171_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_171
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1320 | 1737796 | 1740822 | - | GH2 |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_1321 | 1740951 | 1741094 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1322 | 1741034 | 1743616 | - | PL11_1 |
| peptidase | Rep_171_c_1 | Rep_171_c_1_1323 | 1744818 | 1746227 | + | S09.UPW |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1324 | 1746686 | 1751257 | + | PL11_2 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1325 | 1751426 | 1753564 | + | PL11_1 |
| TF | Rep_171_c_1 | Rep_171_c_1_1326 | 1753780 | 1757349 | - | HTH_AraC |
| pfam | Rep_171_c_1 | Rep_171_c_1_1327 | 1757520 | 1760729 | + | CBM_4_9 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1328 | 1760742 | 1763150 | + | PL11_1 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1329 | 1763194 | 1765581 | + | GH2 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1330 | 1765707 | 1770566 | + | GH106 | GH28 | GH43_24 |
| TC | Rep_171_c_1 | Rep_171_c_1_1331 | 1771337 | 1772194 | + | 1.A.30.2.9 |
Gene ID: Rep_171_c_1_1320
Type: CAZyme
Location: 1737796 - 1740822 (-)
Type: CAZyme
Location: 1737796 - 1740822 (-)
Gene ID: Rep_171_c_1_1321
Type:
Location: 1740951 - 1741094 (+)
Type:
Location: 1740951 - 1741094 (+)
Gene ID: Rep_171_c_1_1322
Type: CAZyme
Location: 1741034 - 1743616 (-)
Type: CAZyme
Location: 1741034 - 1743616 (-)
Gene ID: Rep_171_c_1_1323
Type: peptidase
Location: 1744818 - 1746227 (+)
Type: peptidase
Location: 1744818 - 1746227 (+)
Gene ID: Rep_171_c_1_1324
Type: CAZyme
Location: 1746686 - 1751257 (+)
Type: CAZyme
Location: 1746686 - 1751257 (+)
Gene ID: Rep_171_c_1_1325
Type: CAZyme
Location: 1751426 - 1753564 (+)
Type: CAZyme
Location: 1751426 - 1753564 (+)
Gene ID: Rep_171_c_1_1326
Type: TF
Location: 1753780 - 1757349 (-)
Type: TF
Location: 1753780 - 1757349 (-)
Gene ID: Rep_171_c_1_1327
Type: pfam
Location: 1757520 - 1760729 (+)
Type: pfam
Location: 1757520 - 1760729 (+)
Gene ID: Rep_171_c_1_1328
Type: CAZyme
Location: 1760742 - 1763150 (+)
Type: CAZyme
Location: 1760742 - 1763150 (+)
Gene ID: Rep_171_c_1_1329
Type: CAZyme
Location: 1763194 - 1765581 (+)
Type: CAZyme
Location: 1763194 - 1765581 (+)
Gene ID: Rep_171_c_1_1330
Type: CAZyme
Location: 1765707 - 1770566 (+)
Type: CAZyme
Location: 1765707 - 1770566 (+)
Gene ID: Rep_171_c_1_1331
Type: TC
Location: 1771337 - 1772194 (+)
Type: TC
Location: 1771337 - 1772194 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.