Cluster: Rep_171_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_171
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_171_c_1 | Rep_171_c_1_1191 | 1583632 | 1584375 | - | 1.B.44.1.2 |
| STP | Rep_171_c_1 | Rep_171_c_1_1192 | 1584631 | 1584801 | + | Fer4 | Fer4 |
| TC | Rep_171_c_1 | Rep_171_c_1_1193 | 1585013 | 1585771 | - | 3.A.25.2.1 |
| STP | Rep_171_c_1 | Rep_171_c_1_1194 | 1585773 | 1586123 | - | Response_reg |
| TC | Rep_171_c_1 | Rep_171_c_1_1195 | 1586210 | 1587679 | - | 2.A.1.1.3 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1196 | 1587834 | 1589810 | - | GH51_2 |
Gene ID: Rep_171_c_1_1191
Type: TC
Location: 1583632 - 1584375 (-)
Type: TC
Location: 1583632 - 1584375 (-)
Gene ID: Rep_171_c_1_1192
Type: STP
Location: 1584631 - 1584801 (+)
Type: STP
Location: 1584631 - 1584801 (+)
Gene ID: Rep_171_c_1_1193
Type: TC
Location: 1585013 - 1585771 (-)
Type: TC
Location: 1585013 - 1585771 (-)
Gene ID: Rep_171_c_1_1194
Type: STP
Location: 1585773 - 1586123 (-)
Type: STP
Location: 1585773 - 1586123 (-)
Gene ID: Rep_171_c_1_1195
Type: TC
Location: 1586210 - 1587679 (-)
Type: TC
Location: 1586210 - 1587679 (-)
Gene ID: Rep_171_c_1_1196
Type: CAZyme
Location: 1587834 - 1589810 (-)
Type: CAZyme
Location: 1587834 - 1589810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.