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Cluster: Rep_171_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_171_c_1 Rep_171_c_1_916 1250325 1255133 + CE12 | CE8
pfam Rep_171_c_1 Rep_171_c_1_917 1255388 1255840 + CTP_transf_like
pfam Rep_171_c_1 Rep_171_c_1_918 1256003 1256386 + YbeY
TC Rep_171_c_1 Rep_171_c_1_919 1256600 1258171 - 9.B.174.1.1
sulfatase Rep_171_c_1 Rep_171_c_1_920 1258253 1259407 - S1_44
pfam Rep_171_c_1 Rep_171_c_1_921 1259443 1260360 - HHH_3 | HHH_3 | HHH_3
TC Rep_171_c_1 Rep_171_c_1_922 1260437 1261621 - 2.A.22.5.3
TC Rep_171_c_1 Rep_171_c_1_923 1261651 1261800 - 2.A.22.5.3
TC Rep_171_c_1 Rep_171_c_1_924 1261886 1263250 - 2.A.22.5.3
Gene ID: Rep_171_c_1_916
Type: CAZyme
Location: 1250325 - 1255133 (+)
Gene ID: Rep_171_c_1_917
Type: pfam
Location: 1255388 - 1255840 (+)
Gene ID: Rep_171_c_1_918
Type: pfam
Location: 1256003 - 1256386 (+)
Gene ID: Rep_171_c_1_919
Type: TC
Location: 1256600 - 1258171 (-)
Gene ID: Rep_171_c_1_920
Type: sulfatase
Location: 1258253 - 1259407 (-)
Gene ID: Rep_171_c_1_921
Type: pfam
Location: 1259443 - 1260360 (-)
Gene ID: Rep_171_c_1_922
Type: TC
Location: 1260437 - 1261621 (-)
Gene ID: Rep_171_c_1_923
Type: TC
Location: 1261651 - 1261800 (-)
Gene ID: Rep_171_c_1_924
Type: TC
Location: 1261886 - 1263250 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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