Cluster: Rep_166_CGC43
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_166
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_166_c_304 | Rep_166_c_304_8 | 4705 | 6270 | - | 3.B.1.1.2 |
| STP | Rep_166_c_304 | Rep_166_c_304_9 | 6318 | 6722 | - | Glyoxalase |
| pfam | Rep_166_c_304 | Rep_166_c_304_10 | 6847 | 8328 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| TC | Rep_166_c_304 | Rep_166_c_304_11 | 8460 | 9134 | + | 9.B.186.1.3 |
| CAZyme | Rep_166_c_304 | Rep_166_c_304_12 | 9154 | 9858 | + | GT51 |
Gene ID: Rep_166_c_304_8
Type: TC
Location: 4705 - 6270 (-)
Type: TC
Location: 4705 - 6270 (-)
Gene ID: Rep_166_c_304_9
Type: STP
Location: 6318 - 6722 (-)
Type: STP
Location: 6318 - 6722 (-)
Gene ID: Rep_166_c_304_10
Type: pfam
Location: 6847 - 8328 (-)
Type: pfam
Location: 6847 - 8328 (-)
Gene ID: Rep_166_c_304_11
Type: TC
Location: 8460 - 9134 (+)
Type: TC
Location: 8460 - 9134 (+)
Gene ID: Rep_166_c_304_12
Type: CAZyme
Location: 9154 - 9858 (+)
Type: CAZyme
Location: 9154 - 9858 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_166_c_304_8 | vegetarian > vegan | 1.15122 | 0.01287 |