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Cluster: Rep_166_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_166_c_62 Rep_166_c_62_3 2193 4676 + 9.B.144.1.4
CAZyme Rep_166_c_62 Rep_166_c_62_4 4825 8940 + GH142 | GH143 | GH43_18
CAZyme Rep_166_c_62 Rep_166_c_62_5 9033 10472 + GH140
TC Rep_166_c_62 Rep_166_c_62_6 11019 12221 + 2.A.6.2.41
TC Rep_166_c_62 Rep_166_c_62_7 12248 15502 + 2.A.6.2.16
TC Rep_166_c_62 Rep_166_c_62_8 15512 16897 + 2.A.6.2.29
Gene ID: Rep_166_c_62_3
Type: TC
Location: 2193 - 4676 (+)
Gene ID: Rep_166_c_62_4
Type: CAZyme
Location: 4825 - 8940 (+)
Gene ID: Rep_166_c_62_5
Type: CAZyme
Location: 9033 - 10472 (+)
Gene ID: Rep_166_c_62_6
Type: TC
Location: 11019 - 12221 (+)
Gene ID: Rep_166_c_62_7
Type: TC
Location: 12248 - 15502 (+)
Gene ID: Rep_166_c_62_8
Type: TC
Location: 15512 - 16897 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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