Cluster: Rep_165_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_165
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_165_c_17 | Rep_165_c_17_24 | 24347 | 25801 | - | 2.A.1.1.3 |
| CAZyme | Rep_165_c_17 | Rep_165_c_17_25 | 25909 | 27900 | - | GH97 |
| TC | Rep_165_c_17 | Rep_165_c_17_26 | 27932 | 28834 | - | 2.A.115.1.1 |
| pfam | Rep_165_c_17 | Rep_165_c_17_27 | 28855 | 29865 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | Rep_165_c_17 | Rep_165_c_17_28 | 30068 | 32140 | + | 2.A.37.2.5 |
| TC | Rep_165_c_17 | Rep_165_c_17_29 | 32176 | 32877 | + | 3.A.1.122.2 |
Gene ID: Rep_165_c_17_24
Type: TC
Location: 24347 - 25801 (-)
Type: TC
Location: 24347 - 25801 (-)
Gene ID: Rep_165_c_17_25
Type: CAZyme
Location: 25909 - 27900 (-)
Type: CAZyme
Location: 25909 - 27900 (-)
Gene ID: Rep_165_c_17_26
Type: TC
Location: 27932 - 28834 (-)
Type: TC
Location: 27932 - 28834 (-)
Gene ID: Rep_165_c_17_27
Type: pfam
Location: 28855 - 29865 (-)
Type: pfam
Location: 28855 - 29865 (-)
Gene ID: Rep_165_c_17_28
Type: TC
Location: 30068 - 32140 (+)
Type: TC
Location: 30068 - 32140 (+)
Gene ID: Rep_165_c_17_29
Type: TC
Location: 32176 - 32877 (+)
Type: TC
Location: 32176 - 32877 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900770395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.