Cluster: Rep_165_CGC29
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_165
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_165_c_7 | Rep_165_c_7_99 | 131082 | 132152 | + | GT2 |
| pfam | Rep_165_c_7 | Rep_165_c_7_100 | 132254 | 133531 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| STP | Rep_165_c_7 | Rep_165_c_7_101 | 133615 | 135426 | + | Aminotran_1_2 |
| CAZyme | Rep_165_c_7 | Rep_165_c_7_102 | 135448 | 136344 | + | GT2 |
| NULL(UNKNOWN) | Rep_165_c_7 | Rep_165_c_7_103 | 136362 | 137288 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_165_c_7 | Rep_165_c_7_104 | 137312 | 138007 | + | LicD |
| CAZyme | Rep_165_c_7 | Rep_165_c_7_105 | 138024 | 138797 | + | GT2 |
| pfam | Rep_165_c_7 | Rep_165_c_7_106 | 138954 | 140447 | - | HipA_C | Couple_hipA |
| TF | Rep_165_c_7 | Rep_165_c_7_107 | 140450 | 140752 | - | HTH_3 |
| TC | Rep_165_c_7 | Rep_165_c_7_108 | 141150 | 142286 | + | 9.B.146.1.4 |
| TC | Rep_165_c_7 | Rep_165_c_7_109 | 142283 | 142858 | + | 9.B.18.1.3 |
| STP | Rep_165_c_7 | Rep_165_c_7_110 | 143034 | 144140 | + | Aminotran_1_2 |
| pfam | Rep_165_c_7 | Rep_165_c_7_111 | 144137 | 144994 | + | LYTB |
| TC | Rep_165_c_7 | Rep_165_c_7_112 | 145051 | 146148 | - | 3.A.1.132.3 |
| pfam | Rep_165_c_7 | Rep_165_c_7_113 | 146161 | 147228 | - | DUF1573 | HYDIN_VesB_CFA65-like_Ig |
| peptidase | Rep_165_c_7 | Rep_165_c_7_114 | 147231 | 152771 | - | I39.UPW |
| TC | Rep_165_c_7 | Rep_165_c_7_115 | 152948 | 153757 | - | 3.A.1.15.4 |
Gene ID: Rep_165_c_7_99
Type: CAZyme
Location: 131082 - 132152 (+)
Type: CAZyme
Location: 131082 - 132152 (+)
Gene ID: Rep_165_c_7_100
Type: pfam
Location: 132254 - 133531 (+)
Type: pfam
Location: 132254 - 133531 (+)
Gene ID: Rep_165_c_7_101
Type: STP
Location: 133615 - 135426 (+)
Type: STP
Location: 133615 - 135426 (+)
Gene ID: Rep_165_c_7_102
Type: CAZyme
Location: 135448 - 136344 (+)
Type: CAZyme
Location: 135448 - 136344 (+)
Gene ID: Rep_165_c_7_103
Type:
Location: 136362 - 137288 (+)
Type:
Location: 136362 - 137288 (+)
Gene ID: Rep_165_c_7_104
Type: pfam
Location: 137312 - 138007 (+)
Type: pfam
Location: 137312 - 138007 (+)
Gene ID: Rep_165_c_7_105
Type: CAZyme
Location: 138024 - 138797 (+)
Type: CAZyme
Location: 138024 - 138797 (+)
Gene ID: Rep_165_c_7_106
Type: pfam
Location: 138954 - 140447 (-)
Type: pfam
Location: 138954 - 140447 (-)
Gene ID: Rep_165_c_7_107
Type: TF
Location: 140450 - 140752 (-)
Type: TF
Location: 140450 - 140752 (-)
Gene ID: Rep_165_c_7_108
Type: TC
Location: 141150 - 142286 (+)
Type: TC
Location: 141150 - 142286 (+)
Gene ID: Rep_165_c_7_109
Type: TC
Location: 142283 - 142858 (+)
Type: TC
Location: 142283 - 142858 (+)
Gene ID: Rep_165_c_7_110
Type: STP
Location: 143034 - 144140 (+)
Type: STP
Location: 143034 - 144140 (+)
Gene ID: Rep_165_c_7_111
Type: pfam
Location: 144137 - 144994 (+)
Type: pfam
Location: 144137 - 144994 (+)
Gene ID: Rep_165_c_7_112
Type: TC
Location: 145051 - 146148 (-)
Type: TC
Location: 145051 - 146148 (-)
Gene ID: Rep_165_c_7_113
Type: pfam
Location: 146161 - 147228 (-)
Type: pfam
Location: 146161 - 147228 (-)
Gene ID: Rep_165_c_7_114
Type: peptidase
Location: 147231 - 152771 (-)
Type: peptidase
Location: 147231 - 152771 (-)
Gene ID: Rep_165_c_7_115
Type: TC
Location: 152948 - 153757 (-)
Type: TC
Location: 152948 - 153757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900770395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.