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Cluster: Rep_165_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_165_c_3 Rep_165_c_3_150 182203 183348 - GT19
pfam Rep_165_c_3 Rep_165_c_3_151 183357 184127 - SurE
TC Rep_165_c_3 Rep_165_c_3_152 184249 185013 + 8.A.3.2.3
pfam Rep_165_c_3 Rep_165_c_3_153 185023 185946 + ParBc | HTH_ParB | ParB_dimer
pfam Rep_165_c_3 Rep_165_c_3_154 185930 186652 + DUF5683
CAZyme Rep_165_c_3 Rep_165_c_3_155 186683 188035 + GH23
STP Rep_165_c_3 Rep_165_c_3_156 188056 190335 + HD
CAZyme Rep_165_c_3 Rep_165_c_3_157 190405 191382 + CE8
Gene ID: Rep_165_c_3_150
Type: CAZyme
Location: 182203 - 183348 (-)
Gene ID: Rep_165_c_3_151
Type: pfam
Location: 183357 - 184127 (-)
Gene ID: Rep_165_c_3_152
Type: TC
Location: 184249 - 185013 (+)
Gene ID: Rep_165_c_3_153
Type: pfam
Location: 185023 - 185946 (+)
Gene ID: Rep_165_c_3_154
Type: pfam
Location: 185930 - 186652 (+)
Gene ID: Rep_165_c_3_155
Type: CAZyme
Location: 186683 - 188035 (+)
Gene ID: Rep_165_c_3_156
Type: STP
Location: 188056 - 190335 (+)
Gene ID: Rep_165_c_3_157
Type: CAZyme
Location: 190405 - 191382 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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