Cluster: Rep_1612_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1612
- CGC Family ID: CGCFAM_04501
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1612_c_19 | Rep_1612_c_19_12 | 16836 | 18008 | + | GT4 |
| STP | Rep_1612_c_19 | Rep_1612_c_19_13 | 18015 | 18773 | + | PIG-L |
| NULL(UNKNOWN) | Rep_1612_c_19 | Rep_1612_c_19_14 | 18757 | 19599 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1612_c_19 | Rep_1612_c_19_15 | 19589 | 20536 | + | GT2 |
| pfam | Rep_1612_c_19 | Rep_1612_c_19_16 | 20537 | 21838 | + | Aminotran_3 |
| TC | Rep_1612_c_19 | Rep_1612_c_19_17 | 21900 | 23525 | + | 3.A.1.121.2 |
Gene ID: Rep_1612_c_19_12
Type: CAZyme
Location: 16836 - 18008 (+)
Type: CAZyme
Location: 16836 - 18008 (+)
Gene ID: Rep_1612_c_19_13
Type: STP
Location: 18015 - 18773 (+)
Type: STP
Location: 18015 - 18773 (+)
Gene ID: Rep_1612_c_19_14
Type:
Location: 18757 - 19599 (+)
Type:
Location: 18757 - 19599 (+)
Gene ID: Rep_1612_c_19_15
Type: CAZyme
Location: 19589 - 20536 (+)
Type: CAZyme
Location: 19589 - 20536 (+)
Gene ID: Rep_1612_c_19_16
Type: pfam
Location: 20537 - 21838 (+)
Type: pfam
Location: 20537 - 21838 (+)
Gene ID: Rep_1612_c_19_17
Type: TC
Location: 21900 - 23525 (+)
Type: TC
Location: 21900 - 23525 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
OMSK01
Species
OMSK01 sp934167935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.