PROTEIN: Rep_1612_c_19_14
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Protein File & Metadata
Source:
Rep_1612_c_19_14.pdb
Genome ID:
Protein ID:
Rep_1612_c_19_14
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Protein Sequence
MIIKNNYFVL EIHNNKVIYN QNELKYNSYQ NLYDILVKYL NRKKKDELKL DGEYEPLNNV 60 EQLVILALSN FYSNLYSLKY DKKLDFSYSY NFPIFKQKWI IKEILEIGDE AFNSHMIVLA 120 DTDDYVVKNV SNKEEYNEFY KKYGYYIRRG DKFFKVKNCN LDYTLNYWNN YCLNKHKKYF 180 NKEAIKVYSE IYSNLGFNSI KITFNNEIVA TSVYFRDEKN KIIYYLITGW NEKYKKYSPC 240 IYIYSKAIQY CHNNNYNFSF CYGLQNYKYQ LLKYFKDNDS 280
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D8PM07-F1-model_v4 | 4 | 277 | 57 | 421 | 0.4529 |
0.5762 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5K7YHP0-F1-model_v4 | GT4 | 6 | 278 | 340 | 679 | 0.4045 |
0.5988 |
| AF-B4UGN4-F1-model_v4 | GT4 | 24 | 278 | 350 | 664 | 0.3964 |
0.6152 |
| AF-B8JF70-F1-model_v4 | GT4 | 24 | 280 | 350 | 665 | 0.3949 |
0.6093 |
| AF-A0A1Y0CB11-F1-model_v4 | GT4 | 19 | 280 | 93 | 729 | 0.3759 |
0.5872 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5K7YHP0 | GT4 | 6 | 278 | 340 | 679 | 0.4045 |
0.5988 |
| A0A4U1HM25 | GT4 | 24 | 278 | 355 | 669 | 0.3952 |
0.618 |
| B8JF70 | GT4 | 24 | 280 | 350 | 665 | 0.3949 |
0.6093 |
| A0A1Y0CB11 | GT4 | 19 | 280 | 93 | 729 | 0.3759 |
0.5872 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7z6a-assembly1.cif.gz_A | 28 | 280 | 38 | 315 | 0.5084 |
0.6204 |
| 1xix-assembly1.cif.gz_A | 28 | 280 | 38 | 316 | 0.5048 |
0.6187 |
| 1xe4-assembly1.cif.gz_A | 28 | 280 | 38 | 316 | 0.5037 |
0.6177 |
| 1xf8-assembly1.cif.gz_A | 28 | 280 | 38 | 316 | 0.5033 |
0.6174 |
| 5vrv-assembly1.cif.gz_B | 29 | 280 | 29 | 287 | 0.4798 |
0.5768 |
| 5vrv-assembly1.cif.gz_A | 29 | 280 | 29 | 288 | 0.4787 |
0.5776 |
| 6lv0-assembly2.cif.gz_B | 29 | 280 | 26 | 286 | 0.4708 |
0.5675 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C3JY60-F1-model_v4 | 38 | 280 | 6 | 231 | 0.5656 |
0.6584 |
| AF-A1U1G9-F1-model_v4 | 37 | 280 | 2 | 233 | 0.5626 |
0.6424 |
| AF-Q4ZRK9-F1-model_v4 | 40 | 280 | 5 | 231 | 0.5625 |
0.6518 |
| AF-Q7NX30-F1-model_v4 | 37 | 280 | 10 | 236 | 0.5608 |
0.6586 |
| AF-Q1QUS3-F1-model_v4 | 37 | 280 | 12 | 241 | 0.5579 |
0.6518 |
| AF-Q0C3S3-F1-model_v4 | 4 | 280 | 2 | 247 | 0.5546 |
0.6205 |
| AF-Q050N5-F1-model_v4 | 42 | 280 | 8 | 242 | 0.5454 |
0.6355 |
| AF-Q04SK8-F1-model_v4 | 41 | 280 | 8 | 242 | 0.5443 |
0.6345 |
| AF-Q72R21-F1-model_v4 | 41 | 280 | 6 | 244 | 0.5438 |
0.6255 |
| AF-Q8F4R6-F1-model_v4 | 41 | 280 | 6 | 242 | 0.5431 |
0.6294 |