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Cluster: Rep_142_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_142_c_3 Rep_142_c_3_29 39356 39982 + 4.B.1.1.1
pfam Rep_142_c_3 Rep_142_c_3_30 39979 40653 + TPK_catalytic | Thi_PPkinase_C
STP Rep_142_c_3 Rep_142_c_3_31 40762 41703 - Fer4
CAZyme Rep_142_c_3 Rep_142_c_3_32 41771 42403 - CE4
pfam Rep_142_c_3 Rep_142_c_3_33 42534 45860 - TMEM260-like
pfam Rep_142_c_3 Rep_142_c_3_34 46129 47505 - Pyr_redox | FAD_binding_2 | DAO | Amino_oxidase | NAD_binding_8
TC Rep_142_c_3 Rep_142_c_3_35 47537 48745 - 2.A.1.57.4
TC Rep_142_c_3 Rep_142_c_3_36 48762 50816 - 1.B.14.8.4
Gene ID: Rep_142_c_3_29
Type: TC
Location: 39356 - 39982 (+)
Gene ID: Rep_142_c_3_30
Type: pfam
Location: 39979 - 40653 (+)
Gene ID: Rep_142_c_3_31
Type: STP
Location: 40762 - 41703 (-)
Gene ID: Rep_142_c_3_32
Type: CAZyme
Location: 41771 - 42403 (-)
Gene ID: Rep_142_c_3_33
Type: pfam
Location: 42534 - 45860 (-)
Gene ID: Rep_142_c_3_34
Type: pfam
Location: 46129 - 47505 (-)
Gene ID: Rep_142_c_3_35
Type: TC
Location: 47537 - 48745 (-)
Gene ID: Rep_142_c_3_36
Type: TC
Location: 48762 - 50816 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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