Cluster: Rep_142_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_142_c_61 | Rep_142_c_61_69 | 89224 | 90111 | + | GH25 |
| pfam | Rep_142_c_61 | Rep_142_c_61_70 | 90035 | 90904 | - | MTS | PrmA | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| NULL(UNKNOWN) | Rep_142_c_61 | Rep_142_c_61_71 | 91068 | 92060 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_142_c_61 | Rep_142_c_61_72 | 92152 | 93795 | + | 1.B.9.4.2 |
Gene ID: Rep_142_c_61_69
Type: CAZyme
Location: 89224 - 90111 (+)
Type: CAZyme
Location: 89224 - 90111 (+)
Gene ID: Rep_142_c_61_70
Type: pfam
Location: 90035 - 90904 (-)
Type: pfam
Location: 90035 - 90904 (-)
Gene ID: Rep_142_c_61_71
Type:
Location: 91068 - 92060 (+)
Type:
Location: 91068 - 92060 (+)
Gene ID: Rep_142_c_61_72
Type: TC
Location: 92152 - 93795 (+)
Type: TC
Location: 92152 - 93795 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella bivia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.