dbCAN Logo

Cluster: Rep_1398_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1398_c_15 Rep_1398_c_15_7 6813 8099 - 1.A.34.1.1
pfam Rep_1398_c_15 Rep_1398_c_15_8 8126 9388 - TcaA_3rd_4th
NULL(UNKNOWN) Rep_1398_c_15 Rep_1398_c_15_9 9395 9733 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1398_c_15 Rep_1398_c_15_10 9992 10582 + 2.A.87.2.3
pfam Rep_1398_c_15 Rep_1398_c_15_11 10809 10991 + SASP
pfam Rep_1398_c_15 Rep_1398_c_15_12 11104 11898 - Exo_endo_phos
TC Rep_1398_c_15 Rep_1398_c_15_13 11900 13567 - 4.A.1.1.17
CAZyme Rep_1398_c_15 Rep_1398_c_15_14 13671 15329 - GH13_31
Gene ID: Rep_1398_c_15_7
Type: TC
Location: 6813 - 8099 (-)
Gene ID: Rep_1398_c_15_8
Type: pfam
Location: 8126 - 9388 (-)
Gene ID: Rep_1398_c_15_9
Type:
Location: 9395 - 9733 (-)
Gene ID: Rep_1398_c_15_10
Type: TC
Location: 9992 - 10582 (+)
Gene ID: Rep_1398_c_15_11
Type: pfam
Location: 10809 - 10991 (+)
Gene ID: Rep_1398_c_15_12
Type: pfam
Location: 11104 - 11898 (-)
Gene ID: Rep_1398_c_15_13
Type: TC
Location: 11900 - 13567 (-)
Gene ID: Rep_1398_c_15_14
Type: CAZyme
Location: 13671 - 15329 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List