Cluster: Rep_1398_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1398
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1398_c_127 | Rep_1398_c_127_48 | 49050 | 49934 | - | 3.A.1.1.28 |
| TC | Rep_1398_c_127 | Rep_1398_c_127_49 | 49934 | 50797 | - | 3.A.1.1.42 |
| TC | Rep_1398_c_127 | Rep_1398_c_127_50 | 50816 | 52069 | - | 3.A.1.1.28 |
| TF | Rep_1398_c_127 | Rep_1398_c_127_51 | 52457 | 53323 | + | HTH_AraC | HTH_AraC |
| TC | Rep_1398_c_127 | Rep_1398_c_127_52 | 53374 | 54732 | - | 2.A.2.3.2 |
| CAZyme | Rep_1398_c_127 | Rep_1398_c_127_53 | 55020 | 57209 | - | GH36 |
Gene ID: Rep_1398_c_127_48
Type: TC
Location: 49050 - 49934 (-)
Type: TC
Location: 49050 - 49934 (-)
Gene ID: Rep_1398_c_127_49
Type: TC
Location: 49934 - 50797 (-)
Type: TC
Location: 49934 - 50797 (-)
Gene ID: Rep_1398_c_127_50
Type: TC
Location: 50816 - 52069 (-)
Type: TC
Location: 50816 - 52069 (-)
Gene ID: Rep_1398_c_127_51
Type: TF
Location: 52457 - 53323 (+)
Type: TF
Location: 52457 - 53323 (+)
Gene ID: Rep_1398_c_127_52
Type: TC
Location: 53374 - 54732 (-)
Type: TC
Location: 53374 - 54732 (-)
Gene ID: Rep_1398_c_127_53
Type: CAZyme
Location: 55020 - 57209 (-)
Type: CAZyme
Location: 55020 - 57209 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.