dbCAN Logo

Cluster: Rep_1398_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1398_c_121 Rep_1398_c_121_1 339 2405 - GH39
TC Rep_1398_c_121 Rep_1398_c_121_2 2610 5210 + 3.A.9.1.2
STP Rep_1398_c_121 Rep_1398_c_121_3 5380 6279 + SIS
TC Rep_1398_c_121 Rep_1398_c_121_4 6302 7681 + 4.A.1.2.9
NULL(UNKNOWN) Rep_1398_c_121 Rep_1398_c_121_5 7852 8457 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_1398_c_121 Rep_1398_c_121_6 8454 11153 + S12.UPW
CAZyme Rep_1398_c_121 Rep_1398_c_121_7 11240 12319 + GH170
Gene ID: Rep_1398_c_121_1
Type: CAZyme
Location: 339 - 2405 (-)
Gene ID: Rep_1398_c_121_2
Type: TC
Location: 2610 - 5210 (+)
Gene ID: Rep_1398_c_121_3
Type: STP
Location: 5380 - 6279 (+)
Gene ID: Rep_1398_c_121_4
Type: TC
Location: 6302 - 7681 (+)
Gene ID: Rep_1398_c_121_5
Type:
Location: 7852 - 8457 (+)
Gene ID: Rep_1398_c_121_6
Type: peptidase
Location: 8454 - 11153 (+)
Gene ID: Rep_1398_c_121_7
Type: CAZyme
Location: 11240 - 12319 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_1398_c_121_2 vegetarian > omnivore 1.24846 0.03761
Rep_1398_c_121_2 vegetarian > vegan 1.32767 0.03778

🧭 Explore Read Mapping of CGC

← Back to Cluster List