Cluster: Rep_1398_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1398
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1398_c_111 | Rep_1398_c_111_4 | 2221 | 2862 | + | 9.B.28.1.2 |
| pfam | Rep_1398_c_111 | Rep_1398_c_111_5 | 2842 | 4185 | - | Gram_pos_anchor | Laminin_G_3 | GH43_C | aBig_2 |
| CAZyme | Rep_1398_c_111 | Rep_1398_c_111_6 | 4249 | 5622 | - | GH43_4 |
| pfam | Rep_1398_c_111 | Rep_1398_c_111_7 | 5805 | 6068 | - | DUF6171 |
| CAZyme | Rep_1398_c_111 | Rep_1398_c_111_8 | 6073 | 7548 | - | GH51_1 |
Gene ID: Rep_1398_c_111_4
Type: TC
Location: 2221 - 2862 (+)
Type: TC
Location: 2221 - 2862 (+)
Gene ID: Rep_1398_c_111_5
Type: pfam
Location: 2842 - 4185 (-)
Type: pfam
Location: 2842 - 4185 (-)
Gene ID: Rep_1398_c_111_6
Type: CAZyme
Location: 4249 - 5622 (-)
Type: CAZyme
Location: 4249 - 5622 (-)
Gene ID: Rep_1398_c_111_7
Type: pfam
Location: 5805 - 6068 (-)
Type: pfam
Location: 5805 - 6068 (-)
Gene ID: Rep_1398_c_111_8
Type: CAZyme
Location: 6073 - 7548 (-)
Type: CAZyme
Location: 6073 - 7548 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.