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Cluster: Rep_1398_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1398_c_105 Rep_1398_c_105_30 29128 30849 - GH29
NULL(UNKNOWN) Rep_1398_c_105 Rep_1398_c_105_31 31034 31171 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1398_c_105 Rep_1398_c_105_32 31329 32708 + 2.A.8.1.13
CAZyme Rep_1398_c_105 Rep_1398_c_105_33 32786 35002 - GH2
TC Rep_1398_c_105 Rep_1398_c_105_34 35220 36095 - 3.A.1.1.45
TC Rep_1398_c_105 Rep_1398_c_105_35 36095 36937 - 3.A.1.1.45
TC Rep_1398_c_105 Rep_1398_c_105_36 37062 38459 - 3.A.1.1.45
STP Rep_1398_c_105 Rep_1398_c_105_37 38829 40313 - CbiA
pfam Rep_1398_c_105 Rep_1398_c_105_38 40306 40968 - Diphthami_syn_2
TC Rep_1398_c_105 Rep_1398_c_105_39 41112 41867 - 3.A.1.14.7
TC Rep_1398_c_105 Rep_1398_c_105_40 41879 42910 - 3.A.1.14.16
STP Rep_1398_c_105 Rep_1398_c_105_41 42891 43820 - Peripla_BP_2
STP Rep_1398_c_105 Rep_1398_c_105_42 44309 45382 - Aminotran_1_2
TC Rep_1398_c_105 Rep_1398_c_105_43 45398 46342 - 9.B.125.2.1
Gene ID: Rep_1398_c_105_30
Type: CAZyme
Location: 29128 - 30849 (-)
Gene ID: Rep_1398_c_105_31
Type:
Location: 31034 - 31171 (-)
Gene ID: Rep_1398_c_105_32
Type: TC
Location: 31329 - 32708 (+)
Gene ID: Rep_1398_c_105_33
Type: CAZyme
Location: 32786 - 35002 (-)
Gene ID: Rep_1398_c_105_34
Type: TC
Location: 35220 - 36095 (-)
Gene ID: Rep_1398_c_105_35
Type: TC
Location: 36095 - 36937 (-)
Gene ID: Rep_1398_c_105_36
Type: TC
Location: 37062 - 38459 (-)
Gene ID: Rep_1398_c_105_37
Type: STP
Location: 38829 - 40313 (-)
Gene ID: Rep_1398_c_105_38
Type: pfam
Location: 40306 - 40968 (-)
Gene ID: Rep_1398_c_105_39
Type: TC
Location: 41112 - 41867 (-)
Gene ID: Rep_1398_c_105_40
Type: TC
Location: 41879 - 42910 (-)
Gene ID: Rep_1398_c_105_41
Type: STP
Location: 42891 - 43820 (-)
Gene ID: Rep_1398_c_105_42
Type: STP
Location: 44309 - 45382 (-)
Gene ID: Rep_1398_c_105_43
Type: TC
Location: 45398 - 46342 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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