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Cluster: Rep_1398_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1398_c_97 Rep_1398_c_97_99 116161 116796 + 3.A.1.122.14
STP Rep_1398_c_97 Rep_1398_c_97_100 117385 118677 + Fer4 | Fer4
CAZyme Rep_1398_c_97 Rep_1398_c_97_101 118981 122505 + GH84
NULL(UNKNOWN) Rep_1398_c_97 Rep_1398_c_97_102 122566 123648 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1398_c_97 Rep_1398_c_97_103 124001 124867 + 3.A.1.3.27
TC Rep_1398_c_97 Rep_1398_c_97_104 125105 125785 + 3.A.1.3.15
TC Rep_1398_c_97 Rep_1398_c_97_105 125772 126494 + 3.A.1.3.25
pfam Rep_1398_c_97 Rep_1398_c_97_106 126691 129291 + Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1
TC Rep_1398_c_97 Rep_1398_c_97_107 129678 130853 - 2.A.4.7.7
Gene ID: Rep_1398_c_97_99
Type: TC
Location: 116161 - 116796 (+)
Gene ID: Rep_1398_c_97_100
Type: STP
Location: 117385 - 118677 (+)
Gene ID: Rep_1398_c_97_101
Type: CAZyme
Location: 118981 - 122505 (+)
Gene ID: Rep_1398_c_97_102
Type:
Location: 122566 - 123648 (-)
Gene ID: Rep_1398_c_97_103
Type: TC
Location: 124001 - 124867 (+)
Gene ID: Rep_1398_c_97_104
Type: TC
Location: 125105 - 125785 (+)
Gene ID: Rep_1398_c_97_105
Type: TC
Location: 125772 - 126494 (+)
Gene ID: Rep_1398_c_97_106
Type: pfam
Location: 126691 - 129291 (+)
Gene ID: Rep_1398_c_97_107
Type: TC
Location: 129678 - 130853 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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