Cluster: Rep_1398_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1398
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1398_c_30 | Rep_1398_c_30_9 | 8743 | 15915 | + | GH2 | GH2 |
| pfam | Rep_1398_c_30 | Rep_1398_c_30_10 | 16006 | 16422 | - | Glyco_hydro_36C |
| pfam | Rep_1398_c_30 | Rep_1398_c_30_11 | 16685 | 17830 | - | VanZ |
| TC | Rep_1398_c_30 | Rep_1398_c_30_12 | 17848 | 19161 | - | 2.A.103.1.3 |
Gene ID: Rep_1398_c_30_9
Type: CAZyme
Location: 8743 - 15915 (+)
Type: CAZyme
Location: 8743 - 15915 (+)
Gene ID: Rep_1398_c_30_10
Type: pfam
Location: 16006 - 16422 (-)
Type: pfam
Location: 16006 - 16422 (-)
Gene ID: Rep_1398_c_30_11
Type: pfam
Location: 16685 - 17830 (-)
Type: pfam
Location: 16685 - 17830 (-)
Gene ID: Rep_1398_c_30_12
Type: TC
Location: 17848 - 19161 (-)
Type: TC
Location: 17848 - 19161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.