Cluster: Rep_1398_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1398
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1398_c_23 | Rep_1398_c_23_27 | 33490 | 35415 | + | 2.A.67.4.2 |
| NULL(UNKNOWN) | Rep_1398_c_23 | Rep_1398_c_23_28 | 35405 | 35749 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1398_c_23 | Rep_1398_c_23_29 | 36074 | 37480 | + | 4.A.1.2.13 |
| CAZyme | Rep_1398_c_23 | Rep_1398_c_23_30 | 37569 | 39230 | + | GH13_29 |
| TF | Rep_1398_c_23 | Rep_1398_c_23_31 | 39267 | 39977 | + | GntR |
| TC | Rep_1398_c_23 | Rep_1398_c_23_32 | 40105 | 41469 | + | 2.A.66.1.33 |
Gene ID: Rep_1398_c_23_27
Type: TC
Location: 33490 - 35415 (+)
Type: TC
Location: 33490 - 35415 (+)
Gene ID: Rep_1398_c_23_28
Type:
Location: 35405 - 35749 (+)
Type:
Location: 35405 - 35749 (+)
Gene ID: Rep_1398_c_23_29
Type: TC
Location: 36074 - 37480 (+)
Type: TC
Location: 36074 - 37480 (+)
Gene ID: Rep_1398_c_23_30
Type: CAZyme
Location: 37569 - 39230 (+)
Type: CAZyme
Location: 37569 - 39230 (+)
Gene ID: Rep_1398_c_23_31
Type: TF
Location: 39267 - 39977 (+)
Type: TF
Location: 39267 - 39977 (+)
Gene ID: Rep_1398_c_23_32
Type: TC
Location: 40105 - 41469 (+)
Type: TC
Location: 40105 - 41469 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.