Cluster: Rep_1336_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1336
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1336_c_13 | Rep_1336_c_13_11 | 7272 | 8135 | - | 1.A.23.3.1 |
| NULL(UNKNOWN) | Rep_1336_c_13 | Rep_1336_c_13_12 | 8113 | 9186 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1336_c_13 | Rep_1336_c_13_13 | 9234 | 10589 | - | 9.A.40.2.2 |
| CAZyme | Rep_1336_c_13 | Rep_1336_c_13_14 | 10606 | 11181 | - | GH73 |
| pfam | Rep_1336_c_13 | Rep_1336_c_13_15 | 11141 | 11635 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TC | Rep_1336_c_13 | Rep_1336_c_13_16 | 11760 | 14333 | - | 3.A.9.1.2 |
Gene ID: Rep_1336_c_13_11
Type: TC
Location: 7272 - 8135 (-)
Type: TC
Location: 7272 - 8135 (-)
Gene ID: Rep_1336_c_13_12
Type:
Location: 8113 - 9186 (-)
Type:
Location: 8113 - 9186 (-)
Gene ID: Rep_1336_c_13_13
Type: TC
Location: 9234 - 10589 (-)
Type: TC
Location: 9234 - 10589 (-)
Gene ID: Rep_1336_c_13_14
Type: CAZyme
Location: 10606 - 11181 (-)
Type: CAZyme
Location: 10606 - 11181 (-)
Gene ID: Rep_1336_c_13_15
Type: pfam
Location: 11141 - 11635 (-)
Type: pfam
Location: 11141 - 11635 (-)
Gene ID: Rep_1336_c_13_16
Type: TC
Location: 11760 - 14333 (-)
Type: TC
Location: 11760 - 14333 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
KA00134
Species
KA00134 sp902488815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.