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PROTEIN: Rep_1336_c_13_12

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Protein File & Metadata
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Source:
Rep_1336_c_13_12.pdb
Genome ID:
Rep_1336
Protein ID:
Rep_1336_c_13_12

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNSLTKKVLA   ILIVILLILV   GVLGSINNKR   QIVKVKDVDL   EGVKDFHLSS   RSCILYNGDY 60
MYFFDKEGNV   LDRLNLDNVN   IKLFFSNDYA   FVVDLDTNII   TQYDDRGFMI   ESFESPGNIF 120
NIRVQNKNII   FHVKNSDKEE   LYLRDYKKDL   AKIYETPNYI   LTFDTKSRNE   FVVGEVFADS 180
TGYKSYIKHF   KDGNKDEQQI   LNEVILDSKI   IGRNVFAVSD   KALYKVSGGE   KKEVKIPNVE 240
GVLMTDRNIL   LLHSGILSTY   NTDLKEKSKS   VVAANADRIE   KISKGVYLIG   QTDIGGEIGT 300
RNEYYTRFPQ   EVEKVEINGL   SIAALRKGRV   TIYKVVNTRE   NPTKGSITDL   DEGGKEN 357
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q497Z0-F1-model_v4 25 337 80 463 0.6127 0.7947
AF-O05854-F1-model_v4 28 334 55 407 0.6119 0.7672
AF-L7N1X6-F1-model_v4 25 356 80 465 0.6089 0.7505
AF-Q9VE10-F1-model_v4 28 337 2 297 0.6053 0.6866
AF-Q0DH92-F1-model_v4 21 336 49 455 0.602 0.7682
AF-C0P3K7-F1-model_v4 21 336 49 458 0.5995 0.767
AF-Q94DV6-F1-model_v4 21 337 49 454 0.5946 0.7562
AF-Q9C5G8-F1-model_v4 21 336 49 467 0.5944 0.7661
AF-Q84J57-F1-model_v4 21 336 51 467 0.5927 0.7644
AF-I1KB48-F1-model_v4 21 336 52 478 0.5906 0.7686
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1D8U2V4-F1-model_v4 PL11 29 339 18 423 0.5649 0.7285
AF-Q8U4F6-F1-model_v4 GH122 36 346 1 389 0.4756 0.629
A0A8F2VYH6 CBM48 , GH13_8 31 357 1 966 0.3966 0.675
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0E2HH93 PL22 30 342 18 389 0.5641 0.683
B0C834 PL11 29 339 46 452 0.5538 0.7318
QYR21985.1 CBM50 48 355 1 395 0.5327 0.7837
A0A160T9M2 CBM96 58 355 28 538 0.5032 0.734
A0A7M2WYV3 CBM96 33 357 79 597 0.4509 0.7339
A0A4R2T0N8 CBM50 46 333 307 579 0.4377 0.6928
A0A6I6JV18 CBM57 28 353 66 443 0.4243 0.7193
A0A160T7B5 GH39 7 357 19 859 0.403 0.6769
D8MPF9 GH28 49 321 23 371 0.401 0.6952
A0A8F2VYH6 CBM48 , GH13_8 31 357 1 966 0.3966 0.675
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6lt0-assembly1.cif.gz_D 29 357 1 329 0.6661 0.7327
6tjg-assembly1.cif.gz_A 31 336 1 320 0.6568 0.7473
6ck1-assembly1.cif.gz_C 49 351 2 346 0.6288 0.7621
6n01-assembly1.cif.gz_B 49 351 3 342 0.6253 0.7539
6cmk-assembly1.cif.gz_B 49 351 3 353 0.6222 0.7599
3v7d-assembly1.cif.gz_B 2 337 1 450 0.6208 0.7485
6n01-assembly2.cif.gz_A 49 351 4 348 0.6205 0.7538
6ck1-assembly1.cif.gz_A 49 351 6 355 0.6192 0.758
4imm-assembly1.cif.gz_A 30 336 1 331 0.6173 0.7144
3v7d-assembly2.cif.gz_D 4 337 4 447 0.6162 0.7448
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q6X9E4-F1-model_v4 25 338 78 464 0.6152 0.7955
AF-L7N1X6-F1-model_v4 25 356 80 465 0.6089 0.7505
AF-Q62ZD8-F1-model_v4 31 337 1 295 0.5904 0.6695
AF-Q54QU5-F1-model_v4 23 355 3 340 0.5803 0.6465
AF-Q1B571-F1-model_v4 33 336 1 280 0.5786 0.6718
AF-A1UJW6-F1-model_v4 33 336 1 280 0.5785 0.6719
AF-A3Q393-F1-model_v4 33 336 1 280 0.5782 0.6719
AF-P0DL28-F1-model_v4 1 356 51 568 0.5729 0.7284
AF-Q5YWV1-F1-model_v4 30 336 1 279 0.5718 0.6656
AF-Q9P6N1-F1-model_v4 40 351 1 330 0.571 0.6519
Download Full SwissProt Results