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Cluster: Rep_1310_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1310_c_20 Rep_1310_c_20_33 36292 37005 + 3.A.1.122.14
NULL(UNKNOWN) Rep_1310_c_20 Rep_1310_c_20_34 36998 37975 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1310_c_20 Rep_1310_c_20_35 37965 39332 + 3.A.1.122.2
peptidase Rep_1310_c_20 Rep_1310_c_20_36 39392 40627 + M20.UPB
CAZyme Rep_1310_c_20 Rep_1310_c_20_37 40772 42151 + GH33
TC Rep_1310_c_20 Rep_1310_c_20_38 42354 44033 + 3.A.1.5.32
TC Rep_1310_c_20 Rep_1310_c_20_39 44102 45067 + 3.A.1.5.20
TC Rep_1310_c_20 Rep_1310_c_20_40 45076 45954 + 3.A.1.5.20
TC Rep_1310_c_20 Rep_1310_c_20_41 45962 46978 + 3.A.1.5.29
TC Rep_1310_c_20 Rep_1310_c_20_42 46965 48017 + 3.A.1.5.29
Gene ID: Rep_1310_c_20_33
Type: TC
Location: 36292 - 37005 (+)
Gene ID: Rep_1310_c_20_34
Type:
Location: 36998 - 37975 (+)
Gene ID: Rep_1310_c_20_35
Type: TC
Location: 37965 - 39332 (+)
Gene ID: Rep_1310_c_20_36
Type: peptidase
Location: 39392 - 40627 (+)
Gene ID: Rep_1310_c_20_37
Type: CAZyme
Location: 40772 - 42151 (+)
Gene ID: Rep_1310_c_20_38
Type: TC
Location: 42354 - 44033 (+)
Gene ID: Rep_1310_c_20_39
Type: TC
Location: 44102 - 45067 (+)
Gene ID: Rep_1310_c_20_40
Type: TC
Location: 45076 - 45954 (+)
Gene ID: Rep_1310_c_20_41
Type: TC
Location: 45962 - 46978 (+)
Gene ID: Rep_1310_c_20_42
Type: TC
Location: 46965 - 48017 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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