PROTEIN: Rep_1310_c_20_34
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Protein File & Metadata
Source:
Rep_1310_c_20_34.pdb
Genome ID:
Protein ID:
Rep_1310_c_20_34
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Protein Sequence
MSENTNEQMT VNVKNQPKIM ISAYRLEPKI AEAGKSFDLY FDLYNTNSKN TIYNLKATIE 60 QNLGAQPQNT GENSSMVSDG SVFSPVNQSN SFYVSALYPW NTAHRQIRMN VLPNAVAGNY 120 VINMTIEYED ADGNQYKSTE AIGIPVVQRA GVTMGNVKSE DLAVGQPTEI SVNIYNTGKD 180 NLSTFMCDVI GKGIKIDNDR KFIGNFKTGT QETFSFTATP LREGEIEGQI MLSYEDSTGK 240 LHTQTLDFNK EVGAGMGEEA MPGENGEMGA YDPNMDPNSG QGGGSLLTSP FIWIGLIAII 300 VLSVVLYRKR KHKKEDEELL IDDED 325
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58901-F1-model_v4 | 9 | 265 | 72 | 407 | 0.5458 |
0.7899 |
| AF-Q58956-F1-model_v4 | 9 | 264 | 36 | 449 | 0.4432 |
0.6923 |
| AF-Q58205-F1-model_v4 | 1 | 255 | 8 | 266 | 0.4426 |
0.6715 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S9HPB9 | CBM13 | 1 | 272 | 111 | 735 | 0.3874 |
0.6479 |
| A0A0X1T6N5 | CBM5 | 12 | 264 | 441 | 635 | 0.3573 |
0.7771 |
| A0A0K2SH33 | CBM50 | 11 | 319 | 35 | 1075 | 0.3324 |
0.5376 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58901-F1-model_v4 | 9 | 265 | 72 | 407 | 0.5458 |
0.7899 |
| AF-P29577-F1-model_v4 | 13 | 216 | 21 | 227 | 0.5445 |
0.7215 |
| AF-Q58956-F1-model_v4 | 9 | 264 | 36 | 449 | 0.4432 |
0.6923 |
| AF-Q58205-F1-model_v4 | 1 | 255 | 8 | 266 | 0.4426 |
0.6715 |
| AF-Q9AIS7-F1-model_v4 | 7 | 253 | 234 | 557 | 0.3959 |
0.6379 |
| AF-Q253E5-F1-model_v4 | 7 | 254 | 235 | 558 | 0.3934 |
0.6319 |
| AF-P23700-F1-model_v4 | 7 | 254 | 233 | 556 | 0.3922 |
0.6292 |
| AF-P94664-F1-model_v4 | 8 | 254 | 235 | 558 | 0.3887 |
0.6263 |
| AF-P0CZ18-F1-model_v4 | 7 | 254 | 234 | 557 | 0.3878 |
0.6218 |
| AF-F0T377-F1-model_v4 | 7 | 254 | 234 | 557 | 0.387 |
0.6203 |